wwPDB validation report of PDB entry 3ZKN

5-(2,2,2-Trifluoro-ethoxy)-pyridine-2-carboxylic acid [3-((S)-2-amino-1,4-dimethyl-6-oxo-1,4,5,6-tetrahydro-pyrimidin-4-yl)-phenyl]-amide

BACE2, ASPARTIC-LIKE PROTEASE 56 KDA, ASPARTYL PROTEASE 1, ASP1, ASP 1, BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME 2, BETA-SITE APP CLEAVING ENZYME 2, DOWN REGION ASPARTIC PROTEASE, DRAP, MEMAPSIN-1, MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 1, THETA-SECRETASE

CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH CHEMICAL LIGAND

THE PDB FILE IS NUMBERED AFTER PDB-ENTRY 2EWY WHICH HAS
NUMBERS 62 LESS THAN THE DATA BANK SEQUENCE.
THE FIRST RESIDUE OF THE HEAVY CHAIN IS PYROGLUTAMIC ACID,
AS IN ALL FABS.THE MAB SEQUENCE WAS DETERMINED
EXPERIMENTALLY.THE C-TERMINUS OF THE FAB AFTER PAPAIN
CLEAVAGE WAS NOT ACCURATELY DETERMINED.
THE MAB SEQUENCE WAS DETERMINED EXPERIMENTALLY.

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS WERE USED BUT NOT OUTPUT. U VALUES REFINED INDIVIDUALLY. NCS NOT USED.

BETA-SECRETASE 2 (E.C.3.4.23.45), FAB HEAVY CHAIN, FAB LIGHT CHAIN

The largest off-origin peak in the Patterson function is 3.76% of the height of the origin peak. No significant pseudotranslation is detected.

20191225.v01 (using entries in the PDB archive December 25th 2019)
structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures