wwPDB validation report of PDB entry 6Z9O

Periplasmic [NiFeSe] hydrogenase, small subunit

Periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing

chain 'A' and ((resid 5 through 46 ) or (resid 112 through 162 ) or (resid 286 through 287))

chain 'A' and ((resid 243 through 283 ) or (resid 284 through 285))

chain 'B' and ((resid 50 through 180 ) or (resid 433 through 495 ) or (resid 500 through 504))

Periplasmic [NiFeSe] hydrogenase, small subunit (E.C.1.12.7.2), Periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing (E.C.1.12.7.2)
Structure of [NiFeSe] hydrogenase G491S variant from Desulfovibrio vulgaris Hildenborough pressurized with Oxygen gas - structure G491A-O2-ld

binding site for residues H2S B 504 and SEC B 489

The largest off-origin peak in the Patterson function is 5.52% of the height of the origin peak. No significant pseudotranslation is detected.

20191225.v01 (using entries in the PDB archive December 25th 2019)

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures