wwPDB validation report of PDB entry 2YOY

BACILLUS AMYLOLIQUEFACIENS CBM33 IN COMPLEX WITH CU(I) AFTER PHOTOREDUCTION

LEADER PEPTIDE WAS NOT INCLUDED IN THE CONSTRUCT BUT REPLACED BY PELB LEADER TO DIRECT PROTEIN TO PERIPLASM

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY

Bacillus amyloliquefaciens CBM33 in complex with Cu(I) reduced using ascorbate

The analyses of the Patterson function reveals a significant off-origin peak that is 58.61 % of the origin peak, indicating pseudo-translational symmetry. The chance of finding a peak of this or larger height by random in a structure without pseudo-translational symmetry is equal to 1.9939e-05. The detected translational NCS is most likely also responsible for the elevated intensity ratio. See the relevant section of the logfile for more details.

20191225.v01 (using entries in the PDB archive December 25th 2019)

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures