wwPDB validation report of PDB entry 6WHQ

U2M-ASN-PRO-GLU-GLN-DLY-TRP-GLY peptide macrocycle

2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID

Histone deacetylases complex with peptide macrocycles

binding site for Di-peptide U2M F 500 and GLY F 507

binding site for Di-peptide U2M F 500 and ASN F 501

binding site for Di-peptide GLN F 504 and DLY F 505

binding site for Di-peptide DLY F 505 and TRP F 506

binding site for Di-peptide U2M G 500 and GLY G 507

binding site for Di-peptide U2M G 500 and ASN G 501

binding site for Di-peptide GLN G 504 and DLY G 505

binding site for Di-peptide DLY G 505 and TRP G 506

binding site for Di-peptide U2M H 500 and ASN H 501

binding site for Di-peptide U2M H 500 and GLY H 504

The largest off-origin peak in the Patterson function is 3.10% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures
20191225.v01 (using entries in the PDB archive December 25th 2019)