wwPDB validation report of PDB entry 2VQ3

FLAT COLLIMATING MIRROR, DOUBLE CRYSTAL MONOCHROMATOR, TOROID FOCUSING MIRROR

NADPH/FLAVIN DEPENDENT OXIDOREDUCTASE, RESIDUES 1-215

NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

STEAP3 DIMER WITH NADPH, SIX-TRANSMEMBRANE EPITHELIAL ANTIGEN OF PROSTATE 3, TUMOR SUPPRESSOR-ACTIVATED PATHWAY PROTEIN 6, HTSAP6, PHYDE, HPHYDE, DUDULIN-2

CRYSTAL STRUCTURE OF THE MEMBRANE PROXIMAL OXIDOREDUCTASE DOMAIN OF HUMAN STEAP3, THE DOMINANT FERRIC REDUCTASE OF THE ERYTHROID TRANSFERRIN CYCLE

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. DISORDERED REGION BETWEEN RESIDUES 159 TO 164 HAS POOR DENSITY FOR SIDE CHAINS.

The analyses of the Patterson function reveals a significant off-origin peak that is 52.35 % of the origin peak, indicating pseudo-translational symmetry. The chance of finding a peak of this or larger height by random in a structure without pseudo-translational symmetry is equal to 4.9221e-05. The detected translational NCS is most likely also responsible for the elevated intensity ratio. See the relevant section of the logfile for more details.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)