wwPDB validation report of PDB entry 3SPY

RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+)

RB69 DNA Polymerase(L561A/S565G/Y567A) Ternary Complex with dUpNpp Opposite dA (Mn2+)

RB69 DNA Polymerase Ternary Complex with dUpCpp Opposite dA

RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (AT rich sequence)

RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (GC rich sequence)

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY

DNA polymerase (E.C.2.7.7.7)/DNA complex
RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA

The largest off-origin peak in the Patterson function is 3.54% of the height of the origin peak. No significant pseudotranslation is detected.

20191225.v01 (using entries in the PDB archive December 25th 2019)
structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures