wwPDB validation report of PDB entry 3RBE

DNA primer strand (Dideoxy-terminated at the 3'-end)
DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DT))-3')

DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3')

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER A BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER T BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION

DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

DNA polymerase IV (E.C.2.7.7.7)/DNA Complex
Dpo4 extension ternary complex with 3'-terminal primer t base opposite the 3-methylcytosine (m3c) lesion

The largest off-origin peak in the Patterson function is 4.87% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)