wwPDB validation report of PDB entry 6QAJ

Endolysin,Transcription intermediary factor 1-beta

Lysis protein,Lysozyme,Muramidase,TIF1-beta,E3 SUMO-protein ligase TRIM28,KRAB-associated protein 1,KAP-1,KRAB-interacting protein 1,KRIP-1,Nuclear corepressor KAP-1,RING finger protein 96,RING-type E3 ubiquitin transferase TIF1-beta,Tripartite motif-containing protein 28

Endolysin,Transcription intermediary factor 1-beta (E.C.3.2.1.17,2.3.2.27)
Structure of the tripartite motif of KAP1/TRIM28

(chain A and ((resid -109 and (name N or name CA or name C or name O or name CB )) or resid -108 through -106 or resid -102 through -96 or resid -94 through -88 or resid -86 or resid -84 through -48 or resid -46 through -25 or resid -23 through -12 or resid -10 through 8 or resid 10 through 13 or (resid 14 and (name N or name CA or name C or name O or name CB )) or resid 16 through 17 or (resid 18 and (name N or name CA or name C or name O or name CB )) or resid 19 through 27 or resid 29 through 72 or resid 74 or resid 76 through 93 or resid 112 through 122 or resid 124 through 126 or resid 128 through 136 or resid 209 through 212 or resid 217 or resid 219 through 229 or resid 232 or resid 235 through 241 or resid 243 or resid 246 through 252 or resid 254 through 274 or resid 276 through 281 or resid 283 through 307 or resid 310 through 336 or resid 338 through 339 or resid 341 through 356 or resid 358 or resid 362 through 373 or (resid 374 and (name N or name CA or name C or name O or name CB )) or resid 378 or resid 385 or resid 387 through 388 or resid 390 through 391 or resid 393 or (resid 394 and (name N or name CA or name C or name O or name CB )) or resid 395 through 399 or resid 402 or resid 405 or resid 503))

(chain B and (resid -109 through -106 or resid -102 through -96 or resid -94 through -89 or (resid -88 and (name N or name CA or name C or name O or name CB )) or resid -86 or resid -84 through -76 or (resid -75 and (name N or name CA or name C or name O or name CB )) or resid -74 through -60 or (resid -59 through -58 and (name N or name CA or name C or name O or name CB )) or resid -57 through -48 or resid -46 through -25 or resid -23 through -12 or resid -10 through 8 or resid 10 through 14 or resid 16 through 27 or resid 29 through 68 or (resid 69 and (name N or name CA or name C or name O or name CB )) or resid 70 through 72 or resid 74 or resid 76 through 93 or resid 112 through 122 or resid 124 through 126 or resid 128 through 136 or resid 209 through 212 or resid 217 or resid 219 through 229 or resid 232 or resid 235 through 241 or resid 243 or resid 246 through 249 or (resid 250 and (name N or name CA or name C or name O or name CB )) or resid 251 through 252 or resid 254 through 274 or resid 276 through 281 or resid 283 through 295 or (resid 296 and (name N or name CA or name C or name O or name CB )) or resid 297 through 307 or resid 310 or (resid 311 and (name N or name CA or name C or name O or name CB )) or resid 312 through 336 or resid 338 through 339 or resid 341 through 346 or (resid 347 and (name N or name CA or name C or name O or name CB )) or resid 348 through 356 or resid 358 or resid 362 through 374 or (resid 378 and (name N or name CA or name C or name O or name CB )) or resid 385 or resid 387 through 388 or resid 390 through 391 or resid 393 through 399 or resid 402 or resid 405 or resid 503))

The largest off-origin peak in the Patterson function is 5.13% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)