wwPDB validation report of PDB entry 4Q6F

Bromodomain adjacent to zinc finger domain protein 2A

Transcription termination factor I-interacting protein 5, TTF-I-interacting protein 5, Tip5, hWALp3

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

Bromodomain adjacent to zinc finger domain protein 2A, Zinc ion
Crystal structure of human BAZ2A PHD zinc finger in complex with unmodified H3K4 histone peptide

BINDING SITE FOR CHAIN F OF UNMODIFIED H3K4 PEPTIDE

BINDING SITE FOR CHAIN G OF UNMODIFIED H3K4 PEPTIDE

BINDING SITE FOR CHAIN H OF UNMODIFIED H3K4 PEPTIDE

The analyses of the Patterson function reveals a significant off-origin peak that is 23.64 % of the origin peak, indicating pseudo-translational symmetry. The chance of finding a peak of this or larger height by random in a structure without pseudo-translational symmetry is equal to 4.4790e-03. The detected translational NCS is most likely also responsible for the elevated intensity ratio. See the relevant section of the logfile for more details.

20191225.v01 (using entries in the PDB archive December 25th 2019)

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures