wwPDB validation report of PDB entry 5M73

Human gene for small cytoplasmic 7SL RNA (7L30.1)

Signal recognition particle 19 kDa protein

Signal recognition particle subunit SRP68

Signal recognition particle subunit SRP72

SRP68,Signal recognition particle 68 kDa protein

SRP72,Signal recognition particle 72 kDa protein

Signal recognition particle 19 kDa protein, Signal recognition particle subunit SRP68, Signal recognition particle subunit SRP72/RNA Complex
Structure of the human SRP S domain with SRP72 RNA-binding domain

(CHAIN G AND (RESSEQ 51:68 OR RESSEQ
70:92 OR RESSEQ 94:96 OR RESSEQ 98:151 OR
RESSEQ 153:219 OR RESSEQ 221:236 OR
RESSEQ 238:242 OR RESSEQ 244))

(CHAIN C AND (RESSEQ 51:68 OR RESSEQ
70:92 OR RESSEQ 94:96 OR RESSEQ 98:151 OR
RESSEQ 153:219 OR RESSEQ 221:236 OR
RESSEQ 238:242 OR RESSEQ 244))

(CHAIN B AND (RESSEQ 14:57 OR RESSEQ
59:73 OR RESSEQ 75:78 OR RESSEQ 80:88 OR
RESSEQ 90:115))

(CHAIN F AND (RESSEQ 14:57 OR RESSEQ
59:73 OR RESSEQ 75:78 OR RESSEQ 80:88 OR
RESSEQ 90:115))

(CHAIN A AND ((RESID 106 AND (NAME P OR
NAME OP1 OR NAME OP2 OR NAME O5 OR NAME
C5 OR NAME C4 OR NAME O4 OR NAME C3 OR
NAME O3 OR NAME C2 OR NAME O2 OR NAME C1
OR NAME N9 OR NAME C8 OR NAME N7 OR NAME
C5 OR NAME C6 OR NAME O6 OR NAME N2 )) OR
(RESID 107 AND (NAME P OR NAME OP1 OR
NAME OP2 OR NAME O5 OR NAME C5 OR NAME C4
OR NAME O4 OR NAME C3 OR NAME O3 OR NAME
C2 OR NAME O2 OR NAME C1 OR NAME N9 OR
NAME C8 OR NAME N7 OR NAME C5 OR NAME C6
OR NAME O6 OR NAME N2 )) OR (RESID 108
AND (NAME P OR NAME OP1 OR NAME OP2 OR
NAME O5 OR NAME C5 OR NAME C4 OR NAME O4
OR NAME C3 OR NAME O3 OR NAME C2 OR NAME
O2 OR NAME C1 OR NAME N1 OR NAME C2 OR
NAME N3 OR NAME C4 OR NAME C5 OR NAME C6 )
) OR (RESID 109 AND (NAME P OR NAME OP1
OR NAME OP2 OR NAME O5 OR NAME C5 OR NAME
C4 OR NAME O4 OR NAME C3 OR NAME O3 OR
NAME C2 OR NAME O2 OR NAME C1 OR NAME N9
OR NAME C8 OR NAME N7 OR NAME C5 OR NAME
C6 OR NAME O6 OR NAME N2 )) OR (RESID 110
AND (NAME P OR NAME OP1 OR NAME OP2 OR
NAME O5 OR NAME C5 OR NAME C4 OR NAME O4
OR NAME C3 OR NAME O3 OR NAME C2 OR NAME
O2 OR NAME C1 OR NAME N1 OR NAME C2 OR
NAME N3 OR NAME C4 OR NAME C5 OR NAME C6 )
) OR RESSEQ 111:112 OR RESSEQ 114:117 OR
RESSEQ 119:168 OR RESSEQ 170:231 OR
RESSEQ 233:249))

(CHAIN E AND ((RESID 106 AND (NAME P OR
NAME OP1 OR NAME OP2 OR NAME O5 OR NAME
C5 OR NAME C4 OR NAME O4 OR NAME C3 OR
NAME O3 OR NAME C2 OR NAME O2 OR NAME C1
OR NAME N9 OR NAME C8 OR NAME N7 OR NAME
C5 OR NAME C6 OR NAME O6 OR NAME N2 )) OR
(RESID 107 AND (NAME P OR NAME OP1 OR
NAME OP2 OR NAME O5 OR NAME C5 OR NAME C4
OR NAME O4 OR NAME C3 OR NAME O3 OR NAME
C2 OR NAME O2 OR NAME C1 OR NAME N9 OR
NAME C8 OR NAME N7 OR NAME C5 OR NAME C6
OR NAME O6 OR NAME N2 )) OR (RESID 108
AND (NAME P OR NAME OP1 OR NAME OP2 OR
NAME O5 OR NAME C5 OR NAME C4 OR NAME O4
OR NAME C3 OR NAME O3 OR NAME C2 OR NAME
O2 OR NAME C1 OR NAME N1 OR NAME C2 OR
NAME N3 OR NAME C4 OR NAME C5 OR NAME C6 )
) OR (RESID 109 AND (NAME P OR NAME OP1
OR NAME OP2 OR NAME O5 OR NAME C5 OR NAME
C4 OR NAME O4 OR NAME C3 OR NAME O3 OR
NAME C2 OR NAME O2 OR NAME C1 OR NAME N9
OR NAME C8 OR NAME N7 OR NAME C5 OR NAME
C6 OR NAME O6 OR NAME N2 )) OR (RESID 110
AND (NAME P OR NAME OP1 OR NAME OP2 OR
NAME O5 OR NAME C5 OR NAME C4 OR NAME O4
OR NAME C3 OR NAME O3 OR NAME C2 OR NAME
O2 OR NAME C1 OR NAME N1 OR NAME C2 OR
NAME N3 OR NAME C4 OR NAME C5 OR NAME C6 )
) OR RESSEQ 111:112 OR RESSEQ 114:117 OR
RESSEQ 119:168 OR RESSEQ 170:231 OR
RESSEQ 233:249))

The largest off-origin peak in the Patterson function is 14.66% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures
20191225.v01 (using entries in the PDB archive December 25th 2019)