wwPDB validation report of PDB entry 3M7W

1,3,4-TRIHYDROXY-5-OXO-CYCLOHEXANECARBOXYLIC ACID

Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2.

Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 with Citrate Bound to the Active Site.

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

3-dehydroquinate dehydratase (E.C.4.2.1.10)
Crystal Structure of Type I 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 in Covalent Complex with Dehydroquinate

The analyses of the Patterson function reveals a significant off-origin peak that is 63.46 % of the origin peak, indicating pseudo-translational symmetry. The chance of finding a peak of this or larger height by random in a structure without pseudo-translational symmetry is equal to 9.6339e-06. The detected translational NCS is most likely also responsible for the elevated intensity ratio. See the relevant section of the logfile for more details.

structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures
20191225.v01 (using entries in the PDB archive December 25th 2019)