wwPDB validation report of PDB entry 5M3W

4AD2 contains the same protein in complex with glucose-1,3-isofagomine.

4AD3 contains the same protein in complex with glucose-1,3-deoxymannojirimycin.

4AD4 contains the same protein in complex with glucose-1,3-isofagomine and alpha-1,2-mannobiose.

4AD5 contains the same protein in complex with glucose-1,3-deoxymannojirimycin and alpha-1,2-mannobiose.

4UTF contains the same protein in complex with mannose-alpha-1,3-isofagomine and alpha-1,2-mannobiose.

4V27 contains the same protein in complex with mannose-alpha-1,3-isofagomine.

4V28 contains an E333Q variant of the same protein in complex with Man-Man-Methylumbelliferone.

5M17 contains the same protein in complex with mannose-alpha-1,2-dideoxymannose.

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-1,2-dideoxymannose and alpha-1,2-mannobiose

The largest off-origin peak in the Patterson function is 4.54% of the height of the origin peak. No significant pseudotranslation is detected.

20191225.v01 (using entries in the PDB archive December 25th 2019)

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures