wwPDB validation report of PDB entry 1LF8

ADP-ribosylation factor binding protein GGA3

Cation-independent mannose-6-phosphate receptor

Golgi-localized, gamma ear-containing, ARF-binding protein 3

CI MAN-6-P receptor, CI-MPR, Insulin-like growth factor II receptor

GGA3-VHS complex with (unphosphorylated) peptide from CI-MPR C-terminus

GGA3-VHS complex with peptide from CD-MPR C-terminus

GGA1-VHS complex with peptide from CI-MPR C-terminus

ADP-ribosylation factor binding protein GGA3, Cation-independent mannose-6-phosphate receptor
Complex of GGA3-VHS Domain and CI-MPR C-terminal Phosphopeptide

Each VHS domain/phosphopeptide complex corresponds to a single biological unit. There are the equivalent of 4 biological complexes per asymmetric unit. The apparent VHS domain dimer is likely a crystallization artifact.

The largest off-origin peak in the Patterson function is 8.68% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)