wwPDB validation report of PDB entry 6JNM

DNA (5'-D(*TP*TP*CP*TP*(5CM)P*TP*GP*TP*TP*TP*TP*G)-3')

DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*AP*A)-3')

Jumonji domain-containing protein 12,Lysine-specific histone demethylase REF6,Protein RELATIVE OF EARLY FLOWERING 6

HYDROGENS HAVE BEEN ADDED IN THE RIDING
POSITIONS

Lysine-specific demethylase REF6/DNA Complex

binding site for Di-nucleotide DT F 4 and 5CM F 5

binding site for Di-nucleotide 5CM F 5 and DT F 6

The largest off-origin peak in the Patterson function is 6.48% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)