wwPDB validation report of PDB entry 6J5J

Cryo-EM structure of the mammalian E-state ATP synthase

ATP synthase subunit alpha, mitochondrial

ATP synthase subunit delta, mitochondrial

ATP synthase peripheral stalk-membrane subunit b

ATP synthase-coupling factor 6, mitochondrial

Mitochondrial H+ transporting ATP synthase subunit c isoform 1

ATP synthase F1 subunit alpha,ATP synthase subunit alpha heart isoform,mitochondrial,ATP synthase subunit alpha liver isoform

ATP synthase F1 subunit epsilon,Inhibitor of F(1)F(o)-ATPase,IF1

ATP synthase peripheral stalk subunit OSCP

ATPase subunit F6,ATP synthase peripheral stalk subunit F6

The sequence of the chain e corresponds to Q03654 in the UniProt database.

The sequence of the chain g corresponds to A0A480XS10 in the UniProt database.

The sequence of the chain u corresponds to F1S9V7 in the UniProt database.

However, there are UNK (unknown residues) in these chains, as the authors do not know how the coordinates align with the sequences. Therefore the residues numbers are meaningless.

As for k chain, the authors don't know the reference sequence in the UniProt database.

ATP synthase subunit alpha, mitochondrial, ATP synthase subunit beta (E.C.7.1.2.2), ATPase inhibitor, ATP synthase subunit gamma, ATP synthase subunit delta, mitochondrial, ATP synthase F1 subunit epsilon, ATP synthase subunit O, mitochondrial, ATP synthase peripheral stalk-membrane subunit b, ATP synthase-coupling factor 6, mitochondrial, ATP synthase subunit d, mitochondrial, ATP synthase subunit e, ATP synthase subunit f, mitochondrial, ATP synthase subunit g, ATP synthase membrane subunit DAPIT, subunit k analog, ATP synthase protein 8, ATP synthase subunit a, Mitochondrial H+ transporting ATP synthase subunit c isoform 1, ATP synthase membrane subunit 6.8PL
geometric validation package for ligand chemistry in protein x-ray structures
20191225.v01 (using entries in the PDB archive December 25th 2019)