wwPDB validation report of PDB entry 6CU3

Crystal structure of a protein arginine N-methyltransferase from Naegleria fowleri

(chain A and (resid 21 or (resid 22 through 23 and (name N or name CA or name C or name O or name CB )) or resid 24 through 26 or resid 28 through 31 or (resid 32 and (name N or name CA or name C or name O or name CB )) or resid 33 through 34 or (resid 35 through 37 and (name N or name CA or name C or name O or name CB )) or resid 38 or resid 41 or (resid 42 through 45 and (name N or name CA or name C or name O or name CB )) or resid 46 or (resid 48 through 49 and (name N or name CA or name C or name O or name CB )) or resid 51 or (resid 52 and (name N or name CA or name C or name O or name CB )) or resid 53 or (resid 54 and (name N or name CA or name C or name O or name CB )) or resid 55 or (resid 56 and (name N or name CA or name C or name O or name CB )) or resid 57 through 58 or (resid 59 through 64 and (name N or name CA or name C or name O or name CB )) or resid 65 through 66 or (resid 75 through 85 and (name N or name CA or name C or name O or name CB )) or resid 86 or (resid 87 through 88 and (name N or name CA or name C or name O or name CB )) or resid 89 through 90 or (resid 91 and (name N or name CA or name C or name O or name CB )) or resid 92 or (resid 93 through 98 and (name N or name CA or name C or name O or name CB )) or resid 99 or (resid 100 through 102 and (name N or name CA or name C or name O or name CB )) or (resid 118 and (name N or name CA or name C or name O or name CB )) or resid 119 or (resid 120 and (name N or name CA or name C or name O or name CB )) or resid 121 through 128 or (resid 129 and (name N or name CA or name C or name O or name CB )) or resid 130 or (resid 132 through 138 and (name N or name CA or name C or name O or name CB )) or resid 139 through 140 or (resid 141 through 143 and (name N or name CA or name C or name O or name CB )) or (resid 152 through 153 and (name N or name CA or name C or name O or name CB )) or resid 154 through 157 or resid 159 through 170 or (resid 171 and (name N or name CA or name C or name O or name CB )) or resid 172 through 175 or (resid 176 and (name N or name CA or name C or name O or name CB )) or resid 177 or (resid 178 and (name N or name CA or name C or name O or name CB )) or resid 179 through 180 or (resid 181 and (name N or name CA or name C or name O or name CB )) or resid 182 or (resid 183 through 184 and (name N or name CA or name C or name O or name CB )) or resid 185 or (resid 186 through 187 and (name N or name CA or name C or name O or name CB )) or resid 188 through 190 or (resid 191 through 192 and (name N or name CA or name C or name O or name CB )) or resid 193 through 208 or (resid 209 and (name N or name CA or name C or name O or name CB )) or resid 210 or (resid 211 through 214 and (name N or name CA or name C or name O or name CB )) or resid 216 or (resid 217 through 221 and (name N or name CA or name C or name O or name CB )) or resid 222 or (resid 223 through 225 and (name N or name CA or name C or name O or name CB )) or resid 226 through 249 or (resid 250 through 251 and (name N or name CA or name C or name O or name CB )) or (resid 259 through 260 and (name N or name CA or name C or name O or name CB )) or resid 261 through 282 or resid 284 through 290 or (resid 292 through 297 and (name N or name CA or name C or name O or name CB )) or resid 298 or (resid 299 and (name N or name CA or name C or name O or name CB )) or resid 300 through 303 or (resid 304 through 305 and (name N or name CA or name C or name O or name CB )) or resid 306 through 309 or resid 311 or (resid 312 and (name N or name CA or name C or name O or name CB )) or resid 313 or (resid 314 and (name N or name CA or name C or name O or name CB )) or resid 315 through 319 or (resid 320 through 321 and (name N or name CA or name C or name O or name CB )) or resid 322 or (resid 323 and (name N or name CA or name C or name O or name CB )) or resid 324 through 325 or (resid 326 and (name N or name CA or name C or name O or name CB )) or resid 327 or (resid 328 and (name N or name CA or name C or name O or name CB or name OXT))))

(chain B and (resid 21 or (resid 22 through 23 and (name N or name CA or name C or name O or name CB )) or resid 24 through 26 or resid 28 through 31 or (resid 32 and (name N or name CA or name C or name O or name CB )) or resid 33 through 34 or (resid 35 through 37 and (name N or name CA or name C or name O or name CB )) or resid 38 or resid 41 or (resid 42 through 45 and (name N or name CA or name C or name O or name CB )) or resid 46 or (resid 48 through 49 and (name N or name CA or name C or name O or name CB )) or resid 51 or (resid 52 and (name N or name CA or name C or name O or name CB )) or resid 53 or (resid 54 and (name N or name CA or name C or name O or name CB )) or resid 55 or (resid 56 and (name N or name CA or name C or name O or name CB )) or resid 57 through 58 or (resid 59 through 64 and (name N or name CA or name C or name O or name CB )) or resid 65 through 66 or (resid 75 through 85 and (name N or name CA or name C or name O or name CB )) or resid 86 or (resid 87 through 88 and (name N or name CA or name C or name O or name CB )) or resid 89 through 90 or (resid 91 and (name N or name CA or name C or name O or name CB )) or resid 92 or (resid 93 through 98 and (name N or name CA or name C or name O or name CB )) or (resid 99 through 102 and (name N or name CA or name C or name O or name CB )) or (resid 118 and (name N or name CA or name C or name O or name CB )) or resid 119 or (resid 120 and (name N or name CA or name C or name O or name CB )) or resid 121 through 128 or (resid 129 and (name N or name CA or name C or name O or name CB )) or resid 130 or (resid 132 through 138 and (name N or name CA or name C or name O or name CB )) or resid 139 through 140 or (resid 141 through 143 and (name N or name CA or name C or name O or name CB )) or (resid 152 through 153 and (name N or name CA or name C or name O or name CB )) or resid 154 through 157 or resid 159 through 170 or (resid 171 and (name N or name CA or name C or name O or name CB )) or resid 172 through 175 or (resid 176 and (name N or name CA or name C or name O or name CB )) or resid 177 or (resid 178 and (name N or name CA or name C or name O or name CB )) or resid 179 through 180 or (resid 181 and (name N or name CA or name C or name O or name CB )) or resid 182 or (resid 183 through 184 and (name N or name CA or name C or name O or name CB )) or resid 185 or (resid 186 through 187 and (name N or name CA or name C or name O or name CB )) or resid 188 through 191 or (resid 192 and (name N or name CA or name C or name O or name CB )) or resid 193 through 208 or (resid 209 and (name N or name CA or name C or name O or name CB )) or resid 210 or (resid 211 through 214 and (name N or name CA or name C or name O or name CB )) or resid 216 or (resid 217 through 221 and (name N or name CA or name C or name O or name CB )) or resid 222 or (resid 223 through 225 and (name N or name CA or name C or name O or name CB )) or resid 226 through 249 or (resid 250 through 251 and (name N or name CA or name C or name O or name CB )) or (resid 259 through 260 and (name N or name CA or name C or name O or name CB )) or resid 261 through 282 or resid 284 through 290 or (resid 292 and (name N or name CA or name C or name O or name CB )) or resid 293 or (resid 294 through 297 and (name N or name CA or name C or name O or name CB )) or resid 298 or (resid 299 and (name N or name CA or name C or name O or name CB )) or resid 300 through 303 or (resid 304 through 305 and (name N or name CA or name C or name O or name CB )) or resid 306 through 309 or resid 311 or (resid 312 and (name N or name CA or name C or name O or name CB )) or resid 313 or (resid 314 and (name N or name CA or name C or name O or name CB )) or resid 315 through 319 or (resid 320 through 321 and (name N or name CA or name C or name O or name CB )) or resid 322 or (resid 323 and (name N or name CA or name C or name O or name CB )) or resid 324 through 325 or (resid 326 and (name N or name CA or name C or name O or name CB )) or resid 327 or (resid 328 and (name N or name CA or name C or name O or name CB or name OXT))))

(chain C and (resid 21 or (resid 22 through 23 and (name N or name CA or name C or name O or name CB )) or resid 24 through 26 or resid 28 through 31 or (resid 32 and (name N or name CA or name C or name O or name CB )) or resid 33 through 34 or (resid 35 through 37 and (name N or name CA or name C or name O or name CB )) or resid 38 or resid 41 or (resid 42 through 45 and (name N or name CA or name C or name O or name CB )) or resid 46 or (resid 48 through 49 and (name N or name CA or name C or name O or name CB )) or resid 51 or (resid 52 and (name N or name CA or name C or name O or name CB )) or resid 53 or (resid 54 and (name N or name CA or name C or name O or name CB )) or resid 55 or (resid 56 and (name N or name CA or name C or name O or name CB )) or resid 57 through 58 or (resid 59 through 64 and (name N or name CA or name C or name O or name CB )) or resid 65 through 66 or (resid 75 through 85 and (name N or name CA or name C or name O or name CB )) or resid 86 or (resid 87 through 88 and (name N or name CA or name C or name O or name CB )) or resid 89 through 90 or (resid 91 and (name N or name CA or name C or name O or name CB )) or resid 92 or (resid 93 through 98 and (name N or name CA or name C or name O or name CB )) or (resid 99 through 102 and (name N or name CA or name C or name O or name CB )) or (resid 118 and (name N or name CA or name C or name O or name CB )) or resid 119 or (resid 120 and (name N or name CA or name C or name O or name CB )) or resid 121 through 128 or (resid 129 and (name N or name CA or name C or name O or name CB )) or resid 130 or (resid 132 through 138 and (name N or name CA or name C or name O or name CB )) or resid 139 through 140 or (resid 141 through 143 and (name N or name CA or name C or name O or name CB )) or (resid 152 through 153 and (name N or name CA or name C or name O or name CB )) or resid 154 through 157 or resid 159 through 208 or (resid 209 and (name N or name CA or name C or name O or name CB )) or resid 210 or (resid 211 through 214 and (name N or name CA or name C or name O or name CB )) or resid 216 or (resid 217 through 221 and (name N or name CA or name C or name O or name CB )) or resid 222 or (resid 223 through 225 and (name N or name CA or name C or name O or name CB )) or resid 226 through 249 or (resid 250 through 251 and (name N or name CA or name C or name O or name CB )) or (resid 259 through 260 and (name N or name CA or name C or name O or name CB )) or resid 261 through 282 or resid 284 through 290 or (resid 292 through 297 and (name N or name CA or name C or name O or name CB )) or resid 298 through 303 or (resid 304 through 305 and (name N or name CA or name C or name O or name CB )) or resid 306 through 309 or resid 311 or (resid 312 and (name N or name CA or name C or name O or name CB )) or resid 313 or (resid 314 and (name N or name CA or name C or name O or name CB )) or resid 315 through 319 or (resid 320 through 321 and (name N or name CA or name C or name O or name CB )) or resid 322 or (resid 323 and (name N or name CA or name C or name O or name CB )) or resid 324 through 325 or (resid 326 and (name N or name CA or name C or name O or name CB )) or resid 327 through 328))

(chain D and (resid 21 through 22 or (resid 23 and (name N or name CA or name C or name O or name CB )) or resid 24 through 26 or resid 28 through 31 or (resid 32 and (name N or name CA or name C or name O or name CB )) or resid 33 through 34 or (resid 35 through 37 and (name N or name CA or name C or name O or name CB )) or resid 38 or resid 41 or (resid 42 through 45 and (name N or name CA or name C or name O or name CB )) or resid 46 or (resid 48 through 49 and (name N or name CA or name C or name O or name CB )) or resid 51 or (resid 52 and (name N or name CA or name C or name O or name CB )) or resid 53 or (resid 54 and (name N or name CA or name C or name O or name CB )) or resid 55 or (resid 56 and (name N or name CA or name C or name O or name CB )) or resid 57 through 58 or (resid 59 through 64 and (name N or name CA or name C or name O or name CB )) or resid 65 through 66 or (resid 75 through 85 and (name N or name CA or name C or name O or name CB )) or resid 86 or (resid 87 through 88 and (name N or name CA or name C or name O or name CB )) or resid 89 through 90 or (resid 91 and (name N or name CA or name C or name O or name CB )) or resid 92 or (resid 93 through 98 and (name N or name CA or name C or name O or name CB )) or (resid 99 through 102 and (name N or name CA or name C or name O or name CB )) or (resid 118 and (name N or name CA or name C or name O or name CB )) or resid 119 or (resid 120 and (name N or name CA or name C or name O or name CB )) or resid 121 through 128 or (resid 129 and (name N or name CA or name C or name O or name CB )) or resid 130 or (resid 132 through 138 and (name N or name CA or name C or name O or name CB )) or resid 139 through 140 or (resid 141 through 143 and (name N or name CA or name C or name O or name CB )) or (resid 152 through 153 and (name N or name CA or name C or name O or name CB )) or resid 154 through 157 or resid 159 through 170 or (resid 171 and (name N or name CA or name C or name O or name CB )) or resid 172 through 175 or (resid 176 and (name N or name CA or name C or name O or name CB )) or resid 177 or (resid 178 and (name N or name CA or name C or name O or name CB )) or resid 179 through 180 or (resid 181 and (name N or name CA or name C or name O or name CB )) or resid 182 or (resid 183 through 184 and (name N or name CA or name C or name O or name CB )) or resid 185 or (resid 186 through 187 and (name N or name CA or name C or name O or name CB )) or resid 188 through 191 or (resid 192 and (name N or name CA or name C or name O or name CB )) or resid 193 through 208 or (resid 209 and (name N or name CA or name C or name O or name CB )) or resid 210 or (resid 211 through 214 and (name N or name CA or name C or name O or name CB )) or resid 216 or (resid 217 through 221 and (name N or name CA or name C or name O or name CB )) or resid 222 or (resid 223 through 225 and (name N or name CA or name C or name O or name CB )) or resid 226 through 249 or (resid 250 through 251 and (name N or name CA or name C or name O or name CB )) or (resid 259 through 260 and (name N or name CA or name C or name O or name CB )) or resid 261 through 282 or resid 284 through 290 or (resid 292 and (name N or name CA or name C or name O or name CB )) or resid 293 or (resid 294 through 297 and (name N or name CA or name C or name O or name CB )) or resid 298 or (resid 299 and (name N or name CA or name C or name O or name CB )) or resid 300 or (resid 301 and (name N or name CA or name C or name O or name CB )) or resid 302 through 303 or (resid 304 through 305 and (name N or name CA or name C or name O or name CB )) or resid 306 through 309 or resid 311 or (resid 312 and (name N or name CA or name C or name O or name CB )) or resid 313 or (resid 314 and (name N or name CA or name C or name O or name CB )) or resid 315 through 319 or (resid 320 through 321 and (name N or name CA or name C or name O or name CB )) or resid 322 or (resid 323 and (name N or name CA or name C or name O or name CB )) or resid 324 through 325 or (resid 326 and (name N or name CA or name C or name O or name CB )) or resid 327 or (resid 328 and (name N or name CA or name C or name O or name CB or name OXT))))

(chain E and (resid 21 or (resid 22 through 23 and (name N or name CA or name C or name O or name CB )) or resid 24 through 26 or resid 28 through 31 or (resid 32 and (name N or name CA or name C or name O or name CB )) or resid 33 through 34 or (resid 35 through 37 and (name N or name CA or name C or name O or name CB )) or resid 38 or resid 41 or (resid 42 through 45 and (name N or name CA or name C or name O or name CB )) or resid 46 or (resid 48 through 49 and (name N or name CA or name C or name O or name CB )) or resid 51 or (resid 52 and (name N or name CA or name C or name O or name CB )) or resid 53 or (resid 54 and (name N or name CA or name C or name O or name CB )) or resid 55 or (resid 56 and (name N or name CA or name C or name O or name CB )) or resid 57 through 58 or (resid 59 through 64 and (name N or name CA or name C or name O or name CB )) or resid 65 through 66 or (resid 75 through 85 and (name N or name CA or name C or name O or name CB )) or resid 86 or (resid 87 through 88 and (name N or name CA or name C or name O or name CB )) or resid 89 through 90 or (resid 91 and (name N or name CA or name C or name O or name CB )) or resid 92 or (resid 93 through 98 and (name N or name CA or name C or name O or name CB )) or resid 99 or (resid 100 through 102 and (name N or name CA or name C or name O or name CB )) or (resid 118 and (name N or name CA or name C or name O or name CB )) or resid 119 or (resid 120 and (name N or name CA or name C or name O or name CB )) or resid 121 through 128 or (resid 129 and (name N or name CA or name C or name O or name CB )) or resid 130 or (resid 132 through 138 and (name N or name CA or name C or name O or name CB )) or resid 139 through 140 or (resid 141 through 143 and (name N or name CA or name C or name O or name CB )) or (resid 152 through 153 and (name N or name CA or name C or name O or name CB )) or resid 154 through 157 or resid 159 through 170 or (resid 171 and (name N or name CA or name C or name O or name CB )) or resid 172 through 175 or (resid 176 and (name N or name CA or name C or name O or name CB )) or resid 177 or (resid 178 and (name N or name CA or name C or name O or name CB )) or resid 179 through 180 or (resid 181 and (name N or name CA or name C or name O or name CB )) or resid 182 or (resid 183 through 184 and (name N or name CA or name C or name O or name CB )) or resid 185 or (resid 186 through 187 and (name N or name CA or name C or name O or name CB )) or resid 188 through 190 or (resid 191 through 192 and (name N or name CA or name C or name O or name CB )) or resid 193 through 208 or (resid 209 and (name N or name CA or name C or name O or name CB )) or resid 210 or (resid 211 through 214 and (name N or name CA or name C or name O or name CB )) or resid 216 or (resid 217 through 221 and (name N or name CA or name C or name O or name CB )) or resid 222 or (resid 223 through 225 and (name N or name CA or name C or name O or name CB )) or resid 226 through 249 or (resid 250 through 251 and (name N or name CA or name C or name O or name CB )) or (resid 259 through 260 and (name N or name CA or name C or name O or name CB )) or resid 261 through 282 or resid 284 through 290 or (resid 292 and (name N or name CA or name C or name O or name CB )) or resid 293 or (resid 294 through 297 and (name N or name CA or name C or name O or name CB )) or resid 298 or (resid 299 and (name N or name CA or name C or name O or name CB )) or resid 300 or (resid 301 and (name N or name CA or name C or name O or name CB )) or resid 302 through 303 or (resid 304 through 305 and (name N or name CA or name C or name O or name CB )) or resid 306 through 309 or resid 311 or (resid 312 and (name N or name CA or name C or name O or name CB )) or resid 313 or (resid 314 and (name N or name CA or name C or name O or name CB )) or resid 315 through 319 or (resid 320 through 321 and (name N or name CA or name C or name O or name CB )) or resid 322 or (resid 323 and (name N or name CA or name C or name O or name CB )) or resid 324 through 325 or (resid 326 and (name N or name CA or name C or name O or name CB )) or resid 327 or (resid 328 and (name N or name CA or name C or name O or name CB or name OXT))))

(chain F and (resid 21 through 26 or resid 28 through 46 or resid 48 through 49 or resid 51 through 130 or resid 132 through 157 or resid 159 through 170 or (resid 171 and (name N or name CA or name C or name O or name CB )) or resid 172 through 175 or (resid 176 and (name N or name CA or name C or name O or name CB )) or resid 177 or (resid 178 and (name N or name CA or name C or name O or name CB )) or resid 179 through 180 or (resid 181 and (name N or name CA or name C or name O or name CB )) or resid 182 or (resid 183 through 184 and (name N or name CA or name C or name O or name CB )) or resid 185 or (resid 186 through 187 and (name N or name CA or name C or name O or name CB )) or resid 188 through 191 or (resid 192 and (name N or name CA or name C or name O or name CB )) or resid 193 through 214 or resid 216 through 251 or resid 259 through 282 or resid 284 through 290 or resid 292 through 309 or resid 311 through 327 or (resid 328 and (name N or name CA or name C or name O or name CB or name OXT))))

The largest off-origin peak in the Patterson function is 17.66% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation
geometric validation package for ligand chemistry in protein x-ray structures
20191225.v01 (using entries in the PDB archive December 25th 2019)