wwPDB validation report of PDB entry 7B4P

7B4O contains the same protein with Zn-Zn metalation

Hydrogens have been added in their riding positions

A Bacteroidetes bacterium CuZn-superoxide dismutase with CuZn metalation

Local NCS retraints between domains: 1 2

Local NCS retraints between domains: 3 4

Local NCS retraints between domains: 5 6

Local NCS retraints between domains: 7 8

Local NCS retraints between domains: 9 10

Local NCS retraints between domains: 11 12

The analyses of the Patterson function reveals a significant off-origin peak that is 50.68 % of the origin peak, indicating pseudo-translational symmetry. The chance of finding a peak of this or larger height by random in a structure without pseudo-translational symmetry is equal to 6.2487e-05. The detected translational NCS is most likely also responsible for the elevated intensity ratio. See the relevant section of the logfile for more details.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)