wwPDB validation report of PDB entry 6AF9

Maillard deglycase,Oncogene DJ1,Parkinson disease protein 7,Parkinsonism-associated deglycase,Protein DJ-1,DJ-1

There are two reaction forms of ISN in this structure. ISN201 is bonded with Cys106 through a double bond opening, and ISN202/203 are bonded to Lys148/182 respectively through Schiff base.

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

DJ-1 with isatin bound (high concentration)

The largest off-origin peak in the Patterson function is 5.88% of the height of the origin peak. No significant pseudotranslation is detected.

structure factor analysis and validation

geometric validation package for ligand chemistry in protein x-ray structures

20191225.v01 (using entries in the PDB archive December 25th 2019)