data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db3g6d_9697#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3g6d.ent _PB_list.Output_file_name bmr5004_3g6d_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5004_3g6d_PB.str _PB_list.AA_seq_one_letter_code VPPSTALRELIEELVNITQNQKAPLCNGSMVWSINLTAGMYCAALESLINVSGCSAIEKTQRMLSGFCPHKVSAGQFSSLHVRDTKIEVAQFVKDLLLHLKKLFRE _PB_list.PB_seq_code zzdfklmmmmmmmmmmmmmmmbdehihiacdddddfklmmmmmmmmmmmmmmbmklmmmmmmmmmmpmbdcdehiacffllmgccddfklmmmmmmmmmmmmmmzz _PB_list.PDB_ID 3G6D _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.26342 _PB_list.PDBX_refine_ls_R_factor_R_work 0.21300 _PB_list.PDBX_refine_ls_d_res_high 3.20 _PB_list.PDBX_refine_ls_d_res_low 15.0 _PB_list.Entry_ID 5004 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . A . 1 MET . 1 5004 1 1 1 1 2 GLY . A . 2 GLY . 1 5004 1 1 1 1 3 PRO . A . 3 PRO . 1 5004 1 1 1 1 4 VAL . A . 4 VAL . 1 5004 1 1 1 1 5 PRO . A . 5 PRO . 1 5004 1 1 1 1 6 PRO . A . 6 PRO d 1 5004 1 1 1 1 7 SER . A . 7 SER f 1 5004 1 1 1 1 8 THR . A . 8 THR k 1 5004 1 1 1 1 9 ALA . A . 9 ALA l 1 5004 1 1 1 1 10 LEU . A . 10 LEU m 1 5004 1 1 1 1 11 ARG . A . 11 ARG m 1 5004 1 1 1 1 12 GLU . A . 12 GLU m 1 5004 1 1 1 1 13 LEU . A . 13 LEU m 1 5004 1 1 1 1 14 ILE . A . 14 ILE m 1 5004 1 1 1 1 15 GLU . A . 15 GLU m 1 5004 1 1 1 1 16 GLU . A . 16 GLU m 1 5004 1 1 1 1 17 LEU . A . 17 LEU m 1 5004 1 1 1 1 18 VAL . A . 18 VAL m 1 5004 1 1 1 1 19 ASN . A . 19 ASN m 1 5004 1 1 1 1 20 ILE . A . 20 ILE m 1 5004 1 1 1 1 21 THR . A . 21 THR m 1 5004 1 1 1 1 22 GLN . A . 22 GLN m 1 5004 1 1 1 1 23 ASN . A . 23 ASN m 1 5004 1 1 1 1 24 GLN . A . 24 GLN m 1 5004 1 1 1 1 25 LYS . A . 25 LYS b 1 5004 1 1 1 1 26 ALA . A . 26 ALA d 1 5004 1 1 1 1 27 PRO . A . 27 PRO e 1 5004 1 1 1 1 28 LEU . A . 28 LEU h 1 5004 1 1 1 1 29 CYS . A . 29 CYS i 1 5004 1 1 1 1 30 ASN . A . 30 ASN h 1 5004 1 1 1 1 31 GLY . A . 31 GLY i 1 5004 1 1 1 1 32 SER . A . 32 SER a 1 5004 1 1 1 1 33 MET . A . 33 MET c 1 5004 1 1 1 1 34 VAL . A . 34 VAL d 1 5004 1 1 1 1 35 TRP . A . 35 TRP d 1 5004 1 1 1 1 36 SER . A . 36 SER d 1 5004 1 1 1 1 37 ILE . A . 37 ILE d 1 5004 1 1 1 1 38 ASN . A . 38 ASN d 1 5004 1 1 1 1 39 LEU . A . 39 LEU f 1 5004 1 1 1 1 40 THR . A . 40 THR k 1 5004 1 1 1 1 41 ALA . A . 41 ALA l 1 5004 1 1 1 1 42 GLY . A . 42 GLY m 1 5004 1 1 1 1 43 MET . A . 43 MET m 1 5004 1 1 1 1 44 TYR . A . 44 TYR m 1 5004 1 1 1 1 45 CYS . A . 45 CYS m 1 5004 1 1 1 1 46 ALA . A . 46 ALA m 1 5004 1 1 1 1 47 ALA . A . 47 ALA m 1 5004 1 1 1 1 48 LEU . A . 48 LEU m 1 5004 1 1 1 1 49 GLU . A . 49 GLU m 1 5004 1 1 1 1 50 SER . A . 50 SER m 1 5004 1 1 1 1 51 LEU . A . 51 LEU m 1 5004 1 1 1 1 52 ILE . A . 52 ILE m 1 5004 1 1 1 1 53 ASN . A . 53 ASN m 1 5004 1 1 1 1 54 VAL . A . 54 VAL m 1 5004 1 1 1 1 55 SER . A . 55 SER m 1 5004 1 1 1 1 56 GLY . A . 56 GLY b 1 5004 1 1 1 1 57 CYS . A . 57 CYS m 1 5004 1 1 1 1 58 SER . A . 58 SER k 1 5004 1 1 1 1 59 ALA . A . 59 ALA l 1 5004 1 1 1 1 60 ILE . A . 60 ILE m 1 5004 1 1 1 1 61 GLU . A . 61 GLU m 1 5004 1 1 1 1 62 LYS . A . 62 LYS m 1 5004 1 1 1 1 63 THR . A . 63 THR m 1 5004 1 1 1 1 64 GLN . A . 64 GLN m 1 5004 1 1 1 1 65 ARG . A . 65 ARG m 1 5004 1 1 1 1 66 MET . A . 66 MET m 1 5004 1 1 1 1 67 LEU . A . 67 LEU m 1 5004 1 1 1 1 68 SER . A . 68 SER m 1 5004 1 1 1 1 69 GLY . A . 69 GLY m 1 5004 1 1 1 1 70 PHE . A . 70 PHE p 1 5004 1 1 1 1 71 CYS . A . 71 CYS m 1 5004 1 1 1 1 72 PRO . A . 72 PRO b 1 5004 1 1 1 1 73 HIS . A . 73 HIS d 1 5004 1 1 1 1 74 LYS . A . 74 LYS c 1 5004 1 1 1 1 75 VAL . A . 75 VAL d 1 5004 1 1 1 1 76 SER . A . 76 SER e 1 5004 1 1 1 1 77 ALA . A . 77 ALA h 1 5004 1 1 1 1 78 GLY . A . 78 GLY i 1 5004 1 1 1 1 79 GLN . A . 79 GLN a 1 5004 1 1 1 1 80 PHE . A . 80 PHE c 1 5004 1 1 1 1 81 SER . A . 81 SER f 1 5004 1 1 1 1 82 SER . A . 82 SER f 1 5004 1 1 1 1 83 LEU . A . 83 LEU l 1 5004 1 1 1 1 84 HIS . A . 84 HIS l 1 5004 1 1 1 1 85 VAL . A . 85 VAL m 1 5004 1 1 1 1 86 ARG . A . 86 ARG g 1 5004 1 1 1 1 87 ASP . A . 87 ASP c 1 5004 1 1 1 1 88 THR . A . 88 THR c 1 5004 1 1 1 1 89 LYS . A . 89 LYS d 1 5004 1 1 1 1 90 ILE . A . 90 ILE d 1 5004 1 1 1 1 91 GLU . A . 91 GLU f 1 5004 1 1 1 1 92 VAL . A . 92 VAL k 1 5004 1 1 1 1 93 ALA . A . 93 ALA l 1 5004 1 1 1 1 94 GLN . A . 94 GLN m 1 5004 1 1 1 1 95 PHE . A . 95 PHE m 1 5004 1 1 1 1 96 VAL . A . 96 VAL m 1 5004 1 1 1 1 97 LYS . A . 97 LYS m 1 5004 1 1 1 1 98 ASP . A . 98 ASP m 1 5004 1 1 1 1 99 LEU . A . 99 LEU m 1 5004 1 1 1 1 100 LEU . A . 100 LEU m 1 5004 1 1 1 1 101 LEU . A . 101 LEU m 1 5004 1 1 1 1 102 HIS . A . 102 HIS m 1 5004 1 1 1 1 103 LEU . A . 103 LEU m 1 5004 1 1 1 1 104 LYS . A . 104 LYS m 1 5004 1 1 1 1 105 LYS . A . 105 LYS m 1 5004 1 1 1 1 106 LEU . A . 106 LEU m 1 5004 1 1 1 1 107 PHE . A . 107 PHE m 1 5004 1 1 1 1 108 ARG . A . 108 ARG . 1 5004 1 1 1 1 109 GLU . A . 109 GLU . 1 5004 1 1 1 1 110 GLY . A . 110 GLY . 1 5004 1 1 1 1 111 ARG . A . 111 ARG . 1 5004 1 1 1 1 112 PHE . A . 112 PHE . 1 5004 1 1 1 1 113 ASN . A . 113 ASN . 1 5004 1 stop_ save_