data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2e2d_7233#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2e2d.ent _PB_list.Output_file_name bmr4679_2e2d_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4679_2e2d_PB.str _PB_list.AA_seq_one_letter_code YNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGP _PB_list.PB_seq_code zzddfklccfbfbdcdddfbacfkbcfklmmmmmmmmmmmmmmmccbdcdddfedjdfbdcdddehjehiabdcebeehifbdcddedehjnopacddfkbccdfbfehjafklmmmmmmmmmnopacdfbfkbmklmbdcdefjllccddfklmmmmmmmnozz _PB_list.PDB_ID 2E2D _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.2313 _PB_list.PDBX_refine_ls_R_factor_R_work 0.19991 _PB_list.PDBX_refine_ls_d_res_high 2.00 _PB_list.PDBX_refine_ls_d_res_low 23.77 _PB_list.Entry_ID 4679 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . A . 1 TYR . 1 4679 1 1 1 1 2 ASN . A . 2 ASN . 1 4679 1 1 1 1 3 VAL . A . 3 VAL d 1 4679 1 1 1 1 4 PHE . A . 4 PHE d 1 4679 1 1 1 1 5 PRO . A . 5 PRO f 1 4679 1 1 1 1 6 ARG . A . 6 ARG k 1 4679 1 1 1 1 7 THR . A . 7 THR l 1 4679 1 1 1 1 8 LEU . A . 8 LEU c 1 4679 1 1 1 1 9 LYS . A . 9 LYS c 1 4679 1 1 1 1 10 TRP . A . 10 TRP f 1 4679 1 1 1 1 11 SER . A . 11 SER b 1 4679 1 1 1 1 12 LYS . A . 12 LYS f 1 4679 1 1 1 1 13 MET . A . 13 MET b 1 4679 1 1 1 1 14 ASN . A . 14 ASN d 1 4679 1 1 1 1 15 LEU . A . 15 LEU c 1 4679 1 1 1 1 16 THR . A . 16 THR d 1 4679 1 1 1 1 17 TYR . A . 17 TYR d 1 4679 1 1 1 1 18 ARG . A . 18 ARG d 1 4679 1 1 1 1 19 ILE . A . 19 ILE f 1 4679 1 1 1 1 20 VAL . A . 20 VAL b 1 4679 1 1 1 1 21 ASN . A . 21 ASN a 1 4679 1 1 1 1 22 TYR . A . 22 TYR c 1 4679 1 1 1 1 23 THR . A . 23 THR f 1 4679 1 1 1 1 24 PRO . A . 24 PRO k 1 4679 1 1 1 1 25 ASP . A . 25 ASP b 1 4679 1 1 1 1 26 MET . A . 26 MET c 1 4679 1 1 1 1 27 THR . A . 27 THR f 1 4679 1 1 1 1 28 HIS . A . 28 HIS k 1 4679 1 1 1 1 29 SER . A . 29 SER l 1 4679 1 1 1 1 30 GLU . A . 30 GLU m 1 4679 1 1 1 1 31 VAL . A . 31 VAL m 1 4679 1 1 1 1 32 GLU . A . 32 GLU m 1 4679 1 1 1 1 33 LYS . A . 33 LYS m 1 4679 1 1 1 1 34 ALA . A . 34 ALA m 1 4679 1 1 1 1 35 PHE . A . 35 PHE m 1 4679 1 1 1 1 36 LYS . A . 36 LYS m 1 4679 1 1 1 1 37 LYS . A . 37 LYS m 1 4679 1 1 1 1 38 ALA . A . 38 ALA m 1 4679 1 1 1 1 39 PHE . A . 39 PHE m 1 4679 1 1 1 1 40 LYS . A . 40 LYS m 1 4679 1 1 1 1 41 VAL . A . 41 VAL m 1 4679 1 1 1 1 42 TRP . A . 42 TRP m 1 4679 1 1 1 1 43 SER . A . 43 SER m 1 4679 1 1 1 1 44 ASP . A . 44 ASP m 1 4679 1 1 1 1 45 VAL . A . 45 VAL c 1 4679 1 1 1 1 46 THR . A . 46 THR c 1 4679 1 1 1 1 47 PRO . A . 47 PRO b 1 4679 1 1 1 1 48 LEU . A . 48 LEU d 1 4679 1 1 1 1 49 ASN . A . 49 ASN c 1 4679 1 1 1 1 50 PHE . A . 50 PHE d 1 4679 1 1 1 1 51 THR . A . 51 THR d 1 4679 1 1 1 1 52 ARG . A . 52 ARG d 1 4679 1 1 1 1 53 LEU . A . 53 LEU f 1 4679 1 1 1 1 54 HIS . A . 54 HIS e 1 4679 1 1 1 1 55 ASP . A . 55 ASP d 1 4679 1 1 1 1 56 GLY . A . 56 GLY j 1 4679 1 1 1 1 57 ILE . A . 57 ILE d 1 4679 1 1 1 1 58 ALA . A . 58 ALA f 1 4679 1 1 1 1 59 ASP . A . 59 ASP b 1 4679 1 1 1 1 60 ILE . A . 60 ILE d 1 4679 1 1 1 1 61 MET . A . 61 MET c 1 4679 1 1 1 1 62 ILE . A . 62 ILE d 1 4679 1 1 1 1 63 SER . A . 63 SER d 1 4679 1 1 1 1 64 PHE . A . 64 PHE d 1 4679 1 1 1 1 65 GLY . A . 65 GLY e 1 4679 1 1 1 1 66 ILE . A . 66 ILE h 1 4679 1 1 1 1 67 LYS . A . 67 LYS j 1 4679 1 1 1 1 68 GLU . A . 68 GLU e 1 4679 1 1 1 1 69 HIS . A . 69 HIS h 1 4679 1 1 1 1 70 GLY . A . 70 GLY i 1 4679 1 1 1 1 71 ASP . A . 71 ASP a 1 4679 1 1 1 1 72 PHE . A . 72 PHE b 1 4679 1 1 1 1 73 TYR . A . 73 TYR d 1 4679 1 1 1 1 74 PRO . A . 74 PRO c 1 4679 1 1 1 1 75 PHE . A . 75 PHE e 1 4679 1 1 1 1 76 ASP . A . 76 ASP b 1 4679 1 1 1 1 77 GLY . A . 77 GLY e 1 4679 1 1 1 1 78 PRO . A . 78 PRO e 1 4679 1 1 1 1 79 SER . A . 79 SER h 1 4679 1 1 1 1 80 GLY . A . 80 GLY i 1 4679 1 1 1 1 81 LEU . A . 81 LEU f 1 4679 1 1 1 1 82 LEU . A . 82 LEU b 1 4679 1 1 1 1 83 ALA . A . 83 ALA d 1 4679 1 1 1 1 84 HIS . A . 84 HIS c 1 4679 1 1 1 1 85 ALA . A . 85 ALA d 1 4679 1 1 1 1 86 PHE . A . 86 PHE d 1 4679 1 1 1 1 87 PRO . A . 87 PRO e 1 4679 1 1 1 1 88 PRO . A . 88 PRO d 1 4679 1 1 1 1 89 GLY . A . 89 GLY e 1 4679 1 1 1 1 90 PRO . A . 90 PRO h 1 4679 1 1 1 1 91 ASN . A . 91 ASN j 1 4679 1 1 1 1 92 TYR . A . 92 TYR n 1 4679 1 1 1 1 93 GLY . A . 93 GLY o 1 4679 1 1 1 1 94 GLY . A . 94 GLY p 1 4679 1 1 1 1 95 ASP . A . 95 ASP a 1 4679 1 1 1 1 96 ALA . A . 96 ALA c 1 4679 1 1 1 1 97 HIS . A . 97 HIS d 1 4679 1 1 1 1 98 PHE . A . 98 PHE d 1 4679 1 1 1 1 99 ASP . A . 99 ASP f 1 4679 1 1 1 1 100 ASP . A . 100 ASP k 1 4679 1 1 1 1 101 ASP . A . 101 ASP b 1 4679 1 1 1 1 102 GLU . A . 102 GLU c 1 4679 1 1 1 1 103 THR . A . 103 THR c 1 4679 1 1 1 1 104 TRP . A . 104 TRP d 1 4679 1 1 1 1 105 THR . A . 105 THR f 1 4679 1 1 1 1 106 SER . A . 106 SER b 1 4679 1 1 1 1 107 SER . A . 107 SER f 1 4679 1 1 1 1 108 SER . A . 108 SER e 1 4679 1 1 1 1 109 LYS . A . 109 LYS h 1 4679 1 1 1 1 110 GLY . A . 110 GLY j 1 4679 1 1 1 1 111 TYR . A . 111 TYR a 1 4679 1 1 1 1 112 ASN . A . 112 ASN f 1 4679 1 1 1 1 113 LEU . A . 113 LEU k 1 4679 1 1 1 1 114 PHE . A . 114 PHE l 1 4679 1 1 1 1 115 LEU . A . 115 LEU m 1 4679 1 1 1 1 116 VAL . A . 116 VAL m 1 4679 1 1 1 1 117 ALA . A . 117 ALA m 1 4679 1 1 1 1 118 ALA . A . 118 ALA m 1 4679 1 1 1 1 119 HIS . A . 119 HIS m 1 4679 1 1 1 1 120 GLU . A . 120 GLU m 1 4679 1 1 1 1 121 PHE . A . 121 PHE m 1 4679 1 1 1 1 122 GLY . A . 122 GLY m 1 4679 1 1 1 1 123 HIS . A . 123 HIS m 1 4679 1 1 1 1 124 SER . A . 124 SER n 1 4679 1 1 1 1 125 LEU . A . 125 LEU o 1 4679 1 1 1 1 126 GLY . A . 126 GLY p 1 4679 1 1 1 1 127 LEU . A . 127 LEU a 1 4679 1 1 1 1 128 ASP . A . 128 ASP c 1 4679 1 1 1 1 129 HIS . A . 129 HIS d 1 4679 1 1 1 1 130 SER . A . 130 SER f 1 4679 1 1 1 1 131 LYS . A . 131 LYS b 1 4679 1 1 1 1 132 ASP . A . 132 ASP f 1 4679 1 1 1 1 133 PRO . A . 133 PRO k 1 4679 1 1 1 1 134 GLY . A . 134 GLY b 1 4679 1 1 1 1 135 ALA . A . 135 ALA m 1 4679 1 1 1 1 136 LEU . A . 136 LEU k 1 4679 1 1 1 1 137 MET . A . 137 MET l 1 4679 1 1 1 1 138 PHE . A . 138 PHE m 1 4679 1 1 1 1 139 PRO . A . 139 PRO b 1 4679 1 1 1 1 140 ILE . A . 140 ILE d 1 4679 1 1 1 1 141 TYR . A . 141 TYR c 1 4679 1 1 1 1 142 THR . A . 142 THR d 1 4679 1 1 1 1 143 TYR . A . 143 TYR e 1 4679 1 1 1 1 144 THR . A . 144 THR f 1 4679 1 1 1 1 145 GLY . A . 145 GLY j 1 4679 1 1 1 1 146 LYS . A . 146 LYS l 1 4679 1 1 1 1 147 SER . A . 147 SER l 1 4679 1 1 1 1 148 HIS . A . 148 HIS c 1 4679 1 1 1 1 149 PHE . A . 149 PHE c 1 4679 1 1 1 1 150 MET . A . 150 MET d 1 4679 1 1 1 1 151 LEU . A . 151 LEU d 1 4679 1 1 1 1 152 PRO . A . 152 PRO f 1 4679 1 1 1 1 153 ASP . A . 153 ASP k 1 4679 1 1 1 1 154 ASP . A . 154 ASP l 1 4679 1 1 1 1 155 ASP . A . 155 ASP m 1 4679 1 1 1 1 156 VAL . A . 156 VAL m 1 4679 1 1 1 1 157 GLN . A . 157 GLN m 1 4679 1 1 1 1 158 GLY . A . 158 GLY m 1 4679 1 1 1 1 159 ILE . A . 159 ILE m 1 4679 1 1 1 1 160 GLN . A . 160 GLN m 1 4679 1 1 1 1 161 SER . A . 161 SER m 1 4679 1 1 1 1 162 LEU . A . 162 LEU n 1 4679 1 1 1 1 163 TYR . A . 163 TYR o 1 4679 1 1 1 1 164 GLY . A . 164 GLY . 1 4679 1 1 1 1 165 PRO . A . 165 PRO . 1 4679 1 stop_ save_