data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1jv4_6521#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1jv4.ent _PB_list.Output_file_name bmr4340_1jv4_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4340_1jv4_PB.str _PB_list.AA_seq_one_letter_code EEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRC _PB_list.PB_seq_code zzafkbmklcfklmgcjdddfbdcdfblmlmgmklcklccdfbdcddfkbccddddddeehiacdddddddddfbehiacddeeiadddddfbaehjmpccddddddeehiacdddddddfbfbdcfklmmmmmmmmmmnopafklcccfklmmmzz _PB_list.PDB_ID 1JV4 _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.265 _PB_list.PDBX_refine_ls_R_factor_R_work 0.206 _PB_list.PDBX_refine_ls_d_res_high 1.75 _PB_list.PDBX_refine_ls_d_res_low 14.0 _PB_list.Entry_ID 4340 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLU . A . 1 GLU . 1 4340 1 1 1 1 2 GLU . A . 2 GLU . 1 4340 1 1 1 1 3 ALA . A . 3 ALA a 1 4340 1 1 1 1 4 SER . A . 4 SER f 1 4340 1 1 1 1 5 SER . A . 5 SER k 1 4340 1 1 1 1 6 THR . A . 6 THR b 1 4340 1 1 1 1 7 GLY . A . 7 GLY m 1 4340 1 1 1 1 8 ARG . A . 8 ARG k 1 4340 1 1 1 1 9 ASN . A . 9 ASN l 1 4340 1 1 1 1 10 PHE . A . 10 PHE c 1 4340 1 1 1 1 11 ASN . A . 11 ASN f 1 4340 1 1 1 1 12 VAL . A . 12 VAL k 1 4340 1 1 1 1 13 GLU . A . 13 GLU l 1 4340 1 1 1 1 14 LYS . A . 14 LYS m 1 4340 1 1 1 1 15 ILE . A . 15 ILE g 1 4340 1 1 1 1 16 ASN . A . 16 ASN c 1 4340 1 1 1 1 17 GLY . A . 17 GLY j 1 4340 1 1 1 1 18 GLU . A . 18 GLU d 1 4340 1 1 1 1 19 TRP . A . 19 TRP d 1 4340 1 1 1 1 20 HIS . A . 20 HIS d 1 4340 1 1 1 1 21 THR . A . 21 THR f 1 4340 1 1 1 1 22 ILE . A . 22 ILE b 1 4340 1 1 1 1 23 ILE . A . 23 ILE d 1 4340 1 1 1 1 24 LEU . A . 24 LEU c 1 4340 1 1 1 1 25 ALA . A . 25 ALA d 1 4340 1 1 1 1 26 SER . A . 26 SER f 1 4340 1 1 1 1 27 ASP . A . 27 ASP b 1 4340 1 1 1 1 28 LYS . A . 28 LYS l 1 4340 1 1 1 1 29 ARG . A . 29 ARG m 1 4340 1 1 1 1 30 GLU . A . 30 GLU l 1 4340 1 1 1 1 31 LYS . A . 31 LYS m 1 4340 1 1 1 1 32 ILE . A . 32 ILE g 1 4340 1 1 1 1 33 GLU . A . 33 GLU m 1 4340 1 1 1 1 34 ASP . A . 34 ASP k 1 4340 1 1 1 1 35 ASN . A . 35 ASN l 1 4340 1 1 1 1 36 GLY . A . 36 GLY c 1 4340 1 1 1 1 37 ASN . A . 37 ASN k 1 4340 1 1 1 1 38 PHE . A . 38 PHE l 1 4340 1 1 1 1 39 ARG . A . 39 ARG c 1 4340 1 1 1 1 40 LEU . A . 40 LEU c 1 4340 1 1 1 1 41 PHE . A . 41 PHE d 1 4340 1 1 1 1 42 LEU . A . 42 LEU f 1 4340 1 1 1 1 43 GLU . A . 43 GLU b 1 4340 1 1 1 1 44 GLN . A . 44 GLN d 1 4340 1 1 1 1 45 ILE . A . 45 ILE c 1 4340 1 1 1 1 46 HIS . A . 46 HIS d 1 4340 1 1 1 1 47 VAL . A . 47 VAL d 1 4340 1 1 1 1 48 LEU . A . 48 LEU f 1 4340 1 1 1 1 49 GLU . A . 49 GLU k 1 4340 1 1 1 1 50 LYS . A . 50 LYS b 1 4340 1 1 1 1 51 SER . A . 51 SER c 1 4340 1 1 1 1 52 LEU . A . 52 LEU c 1 4340 1 1 1 1 53 VAL . A . 53 VAL d 1 4340 1 1 1 1 54 LEU . A . 54 LEU d 1 4340 1 1 1 1 55 LYS . A . 55 LYS d 1 4340 1 1 1 1 56 PHE . A . 56 PHE d 1 4340 1 1 1 1 57 HIS . A . 57 HIS d 1 4340 1 1 1 1 58 THR . A . 58 THR d 1 4340 1 1 1 1 59 VAL . A . 59 VAL e 1 4340 1 1 1 1 60 ARG . A . 60 ARG e 1 4340 1 1 1 1 61 ASP . A . 61 ASP h 1 4340 1 1 1 1 62 GLU . A . 62 GLU i 1 4340 1 1 1 1 63 GLU . A . 63 GLU a 1 4340 1 1 1 1 64 CYS . A . 64 CYS c 1 4340 1 1 1 1 65 SER . A . 65 SER d 1 4340 1 1 1 1 66 GLU . A . 66 GLU d 1 4340 1 1 1 1 67 LEU . A . 67 LEU d 1 4340 1 1 1 1 68 SER . A . 68 SER d 1 4340 1 1 1 1 69 MET . A . 69 MET d 1 4340 1 1 1 1 70 VAL . A . 70 VAL d 1 4340 1 1 1 1 71 ALA . A . 71 ALA d 1 4340 1 1 1 1 72 ASP . A . 72 ASP d 1 4340 1 1 1 1 73 LYS . A . 73 LYS d 1 4340 1 1 1 1 74 THR . A . 74 THR f 1 4340 1 1 1 1 75 GLU . A . 75 GLU b 1 4340 1 1 1 1 76 LYS . A . 76 LYS e 1 4340 1 1 1 1 77 ALA . A . 77 ALA h 1 4340 1 1 1 1 78 GLY . A . 78 GLY i 1 4340 1 1 1 1 79 GLU . A . 79 GLU a 1 4340 1 1 1 1 80 TYR . A . 80 TYR c 1 4340 1 1 1 1 81 SER . A . 81 SER d 1 4340 1 1 1 1 82 VAL . A . 82 VAL d 1 4340 1 1 1 1 83 THR . A . 83 THR e 1 4340 1 1 1 1 84 TYR . A . 84 TYR e 1 4340 1 1 1 1 85 ASP . A . 85 ASP i 1 4340 1 1 1 1 86 GLY . A . 86 GLY a 1 4340 1 1 1 1 87 PHE . A . 87 PHE d 1 4340 1 1 1 1 88 ASN . A . 88 ASN d 1 4340 1 1 1 1 89 THR . A . 89 THR d 1 4340 1 1 1 1 90 PHE . A . 90 PHE d 1 4340 1 1 1 1 91 THR . A . 91 THR d 1 4340 1 1 1 1 92 ILE . A . 92 ILE f 1 4340 1 1 1 1 93 PRO . A . 93 PRO b 1 4340 1 1 1 1 94 LYS . A . 94 LYS a 1 4340 1 1 1 1 95 THR . A . 95 THR e 1 4340 1 1 1 1 96 ASP . A . 96 ASP h 1 4340 1 1 1 1 97 TYR . A . 97 TYR j 1 4340 1 1 1 1 98 ASP . A . 98 ASP m 1 4340 1 1 1 1 99 ASN . A . 99 ASN p 1 4340 1 1 1 1 100 PHE . A . 100 PHE c 1 4340 1 1 1 1 101 LEU . A . 101 LEU c 1 4340 1 1 1 1 102 MET . A . 102 MET d 1 4340 1 1 1 1 103 ALA . A . 103 ALA d 1 4340 1 1 1 1 104 HIS . A . 104 HIS d 1 4340 1 1 1 1 105 LEU . A . 105 LEU d 1 4340 1 1 1 1 106 ILE . A . 106 ILE d 1 4340 1 1 1 1 107 ASN . A . 107 ASN d 1 4340 1 1 1 1 108 GLU . A . 108 GLU e 1 4340 1 1 1 1 109 LYS . A . 109 LYS e 1 4340 1 1 1 1 110 ASP . A . 110 ASP h 1 4340 1 1 1 1 111 GLY . A . 111 GLY i 1 4340 1 1 1 1 112 GLU . A . 112 GLU a 1 4340 1 1 1 1 113 THR . A . 113 THR c 1 4340 1 1 1 1 114 PHE . A . 114 PHE d 1 4340 1 1 1 1 115 GLN . A . 115 GLN d 1 4340 1 1 1 1 116 LEU . A . 116 LEU d 1 4340 1 1 1 1 117 MET . A . 117 MET d 1 4340 1 1 1 1 118 GLY . A . 118 GLY d 1 4340 1 1 1 1 119 LEU . A . 119 LEU d 1 4340 1 1 1 1 120 TYR . A . 120 TYR d 1 4340 1 1 1 1 121 GLY . A . 121 GLY f 1 4340 1 1 1 1 122 ARG . A . 122 ARG b 1 4340 1 1 1 1 123 GLU . A . 123 GLU f 1 4340 1 1 1 1 124 PRO . A . 124 PRO b 1 4340 1 1 1 1 125 ASP . A . 125 ASP d 1 4340 1 1 1 1 126 LEU . A . 126 LEU c 1 4340 1 1 1 1 127 SER . A . 127 SER f 1 4340 1 1 1 1 128 SER . A . 128 SER k 1 4340 1 1 1 1 129 ASP . A . 129 ASP l 1 4340 1 1 1 1 130 ILE . A . 130 ILE m 1 4340 1 1 1 1 131 LYS . A . 131 LYS m 1 4340 1 1 1 1 132 GLU . A . 132 GLU m 1 4340 1 1 1 1 133 ARG . A . 133 ARG m 1 4340 1 1 1 1 134 PHE . A . 134 PHE m 1 4340 1 1 1 1 135 ALA . A . 135 ALA m 1 4340 1 1 1 1 136 GLN . A . 136 GLN m 1 4340 1 1 1 1 137 LEU . A . 137 LEU m 1 4340 1 1 1 1 138 CYS . A . 138 CYS m 1 4340 1 1 1 1 139 GLU . A . 139 GLU m 1 4340 1 1 1 1 140 GLU . A . 140 GLU n 1 4340 1 1 1 1 141 HIS . A . 141 HIS o 1 4340 1 1 1 1 142 GLY . A . 142 GLY p 1 4340 1 1 1 1 143 ILE . A . 143 ILE a 1 4340 1 1 1 1 144 LEU . A . 144 LEU f 1 4340 1 1 1 1 145 ARG . A . 145 ARG k 1 4340 1 1 1 1 146 GLU . A . 146 GLU l 1 4340 1 1 1 1 147 ASN . A . 147 ASN c 1 4340 1 1 1 1 148 ILE . A . 148 ILE c 1 4340 1 1 1 1 149 ILE . A . 149 ILE c 1 4340 1 1 1 1 150 ASP . A . 150 ASP f 1 4340 1 1 1 1 151 LEU . A . 151 LEU k 1 4340 1 1 1 1 152 SER . A . 152 SER l 1 4340 1 1 1 1 153 ASN . A . 153 ASN m 1 4340 1 1 1 1 154 ALA . A . 154 ALA m 1 4340 1 1 1 1 155 ASN . A . 155 ASN m 1 4340 1 1 1 1 156 ARG . A . 156 ARG . 1 4340 1 1 1 1 157 CYS . A . 157 CYS . 1 4340 1 1 1 1 158 LEU . A . 158 LEU . 1 4340 1 1 1 1 159 GLN . A . 159 GLN . 1 4340 1 1 1 1 160 ALA . A . 160 ALA . 1 4340 1 1 1 1 161 ARG . A . 161 ARG . 1 4340 1 1 1 1 162 GLU . A . 162 GLU . 1 4340 1 stop_ save_