data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1rge_6570#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1rgf.ent _PB_list.Output_file_name bmr4259_1rgf_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4259_1rgf_PB.str _PB_list.AA_seq_one_letter_code DVSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNRESVLPTQSYGYYHEYTVITPGARTRGTRRIITGEATQEDYYTGDHYATFSLIDQTC _PB_list.PB_seq_code zzhjadfklpcfklmmmmmmmmnnpaafbfkgopaceklnomaccddehkaccdddddehiablbjbdcdddfbehiacddfegomaccdddfkzz _PB_list.PDB_ID 1RGF _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_d_res_high 1.20 _PB_list.PDBX_refine_ls_d_res_low 10.0 _PB_list.Entry_ID 4259 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ASP . A . 1 ASP . 1 4259 1 1 1 1 2 VAL . A . 2 VAL . 1 4259 1 1 1 1 3 SER . A . 3 SER h 1 4259 1 1 1 1 4 GLY . A . 4 GLY j 1 4259 1 1 1 1 5 THR . A . 5 THR a 1 4259 1 1 1 1 6 VAL . A . 6 VAL d 1 4259 1 1 1 1 7 CYS . A . 7 CYS f 1 4259 1 1 1 1 8 LEU . A . 8 LEU k 1 4259 1 1 1 1 9 SER . A . 9 SER l 1 4259 1 1 1 1 10 ALA . A . 10 ALA p 1 4259 1 1 1 1 11 LEU . A . 11 LEU c 1 4259 1 1 1 1 12 PRO . A . 12 PRO f 1 4259 1 1 1 1 13 PRO . A . 13 PRO k 1 4259 1 1 1 1 14 GLU . A . 14 GLU l 1 4259 1 1 1 1 15 ALA . A . 15 ALA m 1 4259 1 1 1 1 16 THR . A . 16 THR m 1 4259 1 1 1 1 17 ASP . A . 17 ASP m 1 4259 1 1 1 1 18 THR . A . 18 THR m 1 4259 1 1 1 1 19 LEU . A . 19 LEU m 1 4259 1 1 1 1 20 ASN . A . 20 ASN m 1 4259 1 1 1 1 21 LEU . A . 21 LEU m 1 4259 1 1 1 1 22 ILE . A . 22 ILE m 1 4259 1 1 1 1 23 ALA . A . 23 ALA n 1 4259 1 1 1 1 24 SER . A . 24 SER n 1 4259 1 1 1 1 25 ASP . A . 25 ASP p 1 4259 1 1 1 1 26 GLY . A . 26 GLY a 1 4259 1 1 1 1 27 PRO . A . 27 PRO a 1 4259 1 1 1 1 28 PHE . A . 28 PHE f 1 4259 1 1 1 1 29 PRO . A . 29 PRO b 1 4259 1 1 1 1 30 TYR . A . 30 TYR f 1 4259 1 1 1 1 31 SER . A . 31 SER k 1 4259 1 1 1 1 32 GLN . A . 32 GLN g 1 4259 1 1 1 1 33 ASP . A . 33 ASP o 1 4259 1 1 1 1 34 GLY . A . 34 GLY p 1 4259 1 1 1 1 35 VAL . A . 35 VAL a 1 4259 1 1 1 1 36 VAL . A . 36 VAL c 1 4259 1 1 1 1 37 PHE . A . 37 PHE e 1 4259 1 1 1 1 38 GLN . A . 38 GLN k 1 4259 1 1 1 1 39 ASN . A . 39 ASN l 1 4259 1 1 1 1 40 ARG . A . 40 ARG n 1 4259 1 1 1 1 41 GLU . A . 41 GLU o 1 4259 1 1 1 1 42 SER . A . 42 SER m 1 4259 1 1 1 1 43 VAL . A . 43 VAL a 1 4259 1 1 1 1 44 LEU . A . 44 LEU c 1 4259 1 1 1 1 45 PRO . A . 45 PRO c 1 4259 1 1 1 1 46 THR . A . 46 THR d 1 4259 1 1 1 1 47 GLN . A . 47 GLN d 1 4259 1 1 1 1 48 SER . A . 48 SER e 1 4259 1 1 1 1 49 TYR . A . 49 TYR h 1 4259 1 1 1 1 50 GLY . A . 50 GLY k 1 4259 1 1 1 1 51 TYR . A . 51 TYR a 1 4259 1 1 1 1 52 TYR . A . 52 TYR c 1 4259 1 1 1 1 53 HIS . A . 53 HIS c 1 4259 1 1 1 1 54 GLU . A . 54 GLU d 1 4259 1 1 1 1 55 TYR . A . 55 TYR d 1 4259 1 1 1 1 56 THR . A . 56 THR d 1 4259 1 1 1 1 57 VAL . A . 57 VAL d 1 4259 1 1 1 1 58 ILE . A . 58 ILE d 1 4259 1 1 1 1 59 THR . A . 59 THR e 1 4259 1 1 1 1 60 PRO . A . 60 PRO h 1 4259 1 1 1 1 61 GLY . A . 61 GLY i 1 4259 1 1 1 1 62 ALA . A . 62 ALA a 1 4259 1 1 1 1 63 ARG . A . 63 ARG b 1 4259 1 1 1 1 64 THR . A . 64 THR l 1 4259 1 1 1 1 65 ARG . A . 65 ARG b 1 4259 1 1 1 1 66 GLY . A . 66 GLY j 1 4259 1 1 1 1 67 THR . A . 67 THR b 1 4259 1 1 1 1 68 ARG . A . 68 ARG d 1 4259 1 1 1 1 69 ARG . A . 69 ARG c 1 4259 1 1 1 1 70 ILE . A . 70 ILE d 1 4259 1 1 1 1 71 ILE . A . 71 ILE d 1 4259 1 1 1 1 72 THR . A . 72 THR d 1 4259 1 1 1 1 73 GLY . A . 73 GLY f 1 4259 1 1 1 1 74 GLU . A . 74 GLU b 1 4259 1 1 1 1 75 ALA . A . 75 ALA e 1 4259 1 1 1 1 76 THR . A . 76 THR h 1 4259 1 1 1 1 77 GLN . A . 77 GLN i 1 4259 1 1 1 1 78 GLU . A . 78 GLU a 1 4259 1 1 1 1 79 ASP . A . 79 ASP c 1 4259 1 1 1 1 80 TYR . A . 80 TYR d 1 4259 1 1 1 1 81 TYR . A . 81 TYR d 1 4259 1 1 1 1 82 THR . A . 82 THR f 1 4259 1 1 1 1 83 GLY . A . 83 GLY e 1 4259 1 1 1 1 84 ASP . A . 84 ASP g 1 4259 1 1 1 1 85 HIS . A . 85 HIS o 1 4259 1 1 1 1 86 TYR . A . 86 TYR m 1 4259 1 1 1 1 87 ALA . A . 87 ALA a 1 4259 1 1 1 1 88 THR . A . 88 THR c 1 4259 1 1 1 1 89 PHE . A . 89 PHE c 1 4259 1 1 1 1 90 SER . A . 90 SER d 1 4259 1 1 1 1 91 LEU . A . 91 LEU d 1 4259 1 1 1 1 92 ILE . A . 92 ILE d 1 4259 1 1 1 1 93 ASP . A . 93 ASP f 1 4259 1 1 1 1 94 GLN . A . 94 GLN k 1 4259 1 1 1 1 95 THR . A . 95 THR . 1 4259 1 1 1 1 96 CYS . A . 96 CYS . 1 4259 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1rge_6570#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1rgf.ent _PB_list.Output_file_name bmr4259_1rgf_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4259_1rgf_PB.str _PB_list.AA_seq_one_letter_code DVSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNRESVLPTQSYGYYHEYTVITPGARTRGTRRIITGEATQEDYYTGDHYATFSLIDQTC _PB_list.PB_seq_code zzhjadfklmcfklmmmmmmmmnnpaafbfkgoiacehlnomaccddehjaccdddddehiabebjbdcdddfbehiacddfegomaccdddfkzz _PB_list.PDB_ID 1RGF _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_d_res_high 1.20 _PB_list.PDBX_refine_ls_d_res_low 10.0 _PB_list.Entry_ID 4259 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ASP . B . 1 ASP . 1 4259 2 1 1 1 2 VAL . B . 2 VAL . 1 4259 2 1 1 1 3 SER . B . 3 SER h 1 4259 2 1 1 1 4 GLY . B . 4 GLY j 1 4259 2 1 1 1 5 THR . B . 5 THR a 1 4259 2 1 1 1 6 VAL . B . 6 VAL d 1 4259 2 1 1 1 7 CYS . B . 7 CYS f 1 4259 2 1 1 1 8 LEU . B . 8 LEU k 1 4259 2 1 1 1 9 SER . B . 9 SER l 1 4259 2 1 1 1 10 ALA . B . 10 ALA m 1 4259 2 1 1 1 11 LEU . B . 11 LEU c 1 4259 2 1 1 1 12 PRO . B . 12 PRO f 1 4259 2 1 1 1 13 PRO . B . 13 PRO k 1 4259 2 1 1 1 14 GLU . B . 14 GLU l 1 4259 2 1 1 1 15 ALA . B . 15 ALA m 1 4259 2 1 1 1 16 THR . B . 16 THR m 1 4259 2 1 1 1 17 ASP . B . 17 ASP m 1 4259 2 1 1 1 18 THR . B . 18 THR m 1 4259 2 1 1 1 19 LEU . B . 19 LEU m 1 4259 2 1 1 1 20 ASN . B . 20 ASN m 1 4259 2 1 1 1 21 LEU . B . 21 LEU m 1 4259 2 1 1 1 22 ILE . B . 22 ILE m 1 4259 2 1 1 1 23 ALA . B . 23 ALA n 1 4259 2 1 1 1 24 SER . B . 24 SER n 1 4259 2 1 1 1 25 ASP . B . 25 ASP p 1 4259 2 1 1 1 26 GLY . B . 26 GLY a 1 4259 2 1 1 1 27 PRO . B . 27 PRO a 1 4259 2 1 1 1 28 PHE . B . 28 PHE f 1 4259 2 1 1 1 29 PRO . B . 29 PRO b 1 4259 2 1 1 1 30 TYR . B . 30 TYR f 1 4259 2 1 1 1 31 SER . B . 31 SER k 1 4259 2 1 1 1 32 GLN . B . 32 GLN g 1 4259 2 1 1 1 33 ASP . B . 33 ASP o 1 4259 2 1 1 1 34 GLY . B . 34 GLY i 1 4259 2 1 1 1 35 VAL . B . 35 VAL a 1 4259 2 1 1 1 36 VAL . B . 36 VAL c 1 4259 2 1 1 1 37 PHE . B . 37 PHE e 1 4259 2 1 1 1 38 GLN . B . 38 GLN h 1 4259 2 1 1 1 39 ASN . B . 39 ASN l 1 4259 2 1 1 1 40 ARG . B . 40 ARG n 1 4259 2 1 1 1 41 GLU . B . 41 GLU o 1 4259 2 1 1 1 42 SER . B . 42 SER m 1 4259 2 1 1 1 43 VAL . B . 43 VAL a 1 4259 2 1 1 1 44 LEU . B . 44 LEU c 1 4259 2 1 1 1 45 PRO . B . 45 PRO c 1 4259 2 1 1 1 46 THR . B . 46 THR d 1 4259 2 1 1 1 47 GLN . B . 47 GLN d 1 4259 2 1 1 1 48 SER . B . 48 SER e 1 4259 2 1 1 1 49 TYR . B . 49 TYR h 1 4259 2 1 1 1 50 GLY . B . 50 GLY j 1 4259 2 1 1 1 51 TYR . B . 51 TYR a 1 4259 2 1 1 1 52 TYR . B . 52 TYR c 1 4259 2 1 1 1 53 HIS . B . 53 HIS c 1 4259 2 1 1 1 54 GLU . B . 54 GLU d 1 4259 2 1 1 1 55 TYR . B . 55 TYR d 1 4259 2 1 1 1 56 THR . B . 56 THR d 1 4259 2 1 1 1 57 VAL . B . 57 VAL d 1 4259 2 1 1 1 58 ILE . B . 58 ILE d 1 4259 2 1 1 1 59 THR . B . 59 THR e 1 4259 2 1 1 1 60 PRO . B . 60 PRO h 1 4259 2 1 1 1 61 GLY . B . 61 GLY i 1 4259 2 1 1 1 62 ALA . B . 62 ALA a 1 4259 2 1 1 1 63 ARG . B . 63 ARG b 1 4259 2 1 1 1 64 THR . B . 64 THR e 1 4259 2 1 1 1 65 ARG . B . 65 ARG b 1 4259 2 1 1 1 66 GLY . B . 66 GLY j 1 4259 2 1 1 1 67 THR . B . 67 THR b 1 4259 2 1 1 1 68 ARG . B . 68 ARG d 1 4259 2 1 1 1 69 ARG . B . 69 ARG c 1 4259 2 1 1 1 70 ILE . B . 70 ILE d 1 4259 2 1 1 1 71 ILE . B . 71 ILE d 1 4259 2 1 1 1 72 THR . B . 72 THR d 1 4259 2 1 1 1 73 GLY . B . 73 GLY f 1 4259 2 1 1 1 74 GLU . B . 74 GLU b 1 4259 2 1 1 1 75 ALA . B . 75 ALA e 1 4259 2 1 1 1 76 THR . B . 76 THR h 1 4259 2 1 1 1 77 GLN . B . 77 GLN i 1 4259 2 1 1 1 78 GLU . B . 78 GLU a 1 4259 2 1 1 1 79 ASP . B . 79 ASP c 1 4259 2 1 1 1 80 TYR . B . 80 TYR d 1 4259 2 1 1 1 81 TYR . B . 81 TYR d 1 4259 2 1 1 1 82 THR . B . 82 THR f 1 4259 2 1 1 1 83 GLY . B . 83 GLY e 1 4259 2 1 1 1 84 ASP . B . 84 ASP g 1 4259 2 1 1 1 85 HIS . B . 85 HIS o 1 4259 2 1 1 1 86 TYR . B . 86 TYR m 1 4259 2 1 1 1 87 ALA . B . 87 ALA a 1 4259 2 1 1 1 88 THR . B . 88 THR c 1 4259 2 1 1 1 89 PHE . B . 89 PHE c 1 4259 2 1 1 1 90 SER . B . 90 SER d 1 4259 2 1 1 1 91 LEU . B . 91 LEU d 1 4259 2 1 1 1 92 ILE . B . 92 ILE d 1 4259 2 1 1 1 93 ASP . B . 93 ASP f 1 4259 2 1 1 1 94 GLN . B . 94 GLN k 1 4259 2 1 1 1 95 THR . B . 95 THR . 1 4259 2 1 1 1 96 CYS . B . 96 CYS . 1 4259 2 stop_ save_