data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1a1m_5593#A _PB_list.Queried_date 2015-07-01 _PB_list.Input_file_name pdb1a1m.ent _PB_list.Output_file_name bmr3079_1a1m_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr3079_1a1m_PB.str _PB_list.AA_seq_one_letter_code GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRPPWIEQEGPEYWDRNTQIFKTNTQTYRENLRIALRYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPHH _PB_list.PB_seq_code zzcddddddddddehiapadddddddehjbdfbdcdfkbghiadddfbfklmmpcfklmmmmmmmmmmmmmmmmmmmmmmmmmnopafkbccdddddedddddffbpafbdcddddeehiafbdcdfklpaccdfbfklmmmmmmmmmnommlmmmmmmmmmmmmmmmmmmmmmmmmmmpccddddddddddfbjkbccdddddehiacfbdcddddeehiackllmccdddddfknopacddddddddehilmmpccddddfkbfbdcddddddezz _PB_list.PDB_ID 1A1M _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_work 0.205 _PB_list.PDBX_refine_ls_d_res_high 2.3 _PB_list.PDBX_refine_ls_d_res_low 15.0 _PB_list.Entry_ID 3079 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ILE . A . 143 THR m 0 3079 1 1 1 1 2 GLN . A . 144 GLN m 0 3079 1 1 1 1 3 ARG . A . 145 ARG m 0 3079 1 1 1 1 4 THR . A . 153 ALA l 0 3079 1 1 1 1 5 PRO . A . 154 GLU m 0 3079 1 1 1 1 6 LYS . A . 155 GLN m 0 3079 1 1 1 1 7 ILE . A . 156 LEU m 0 3079 1 1 1 1 8 GLN . A . 157 ARG m 0 3079 1 1 1 1 9 VAL . A . 158 ALA m 0 3079 1 1 1 1 10 TYR . A . 159 TYR m 0 3079 1 1 1 1 11 SER . A . 166 GLU m 0 3079 1 1 1 1 12 ARG . A . 169 ARG m 0 3079 1 1 1 1 13 HIS . A . 170 ARG m 0 3079 1 1 1 1 14 PRO . A . 171 TYR m 0 3079 1 1 1 1 15 ALA . A . 172 LEU m 0 3079 1 1 1 1 16 GLU . A . 173 GLU m 0 3079 1 1 1 1 17 ASN . A . 174 ASN m 0 3079 1 1 1 1 18 GLY . A . 175 GLY m 1 3079 1 1 1 1 19 LYS . A . 176 LYS m 0 3079 1 1 1 1 20 SER . A . 195 SER j 0 3079 1 1 1 1 21 ASN . A . 196 ASP k 0 3079 1 1 1 1 22 PHE . A . 197 HIS b 0 3079 1 1 1 1 23 LEU . A . 201 LEU d 0 3079 1 1 1 1 24 ASN . A . 202 ARG d 0 3079 1 1 1 1 25 CYS . A . 203 CYS d 0 3079 1 1 1 1 26 TYR . A . 204 TRP d 0 3079 1 1 1 1 27 VAL . A . 205 ALA e 0 3079 1 1 1 1 28 SER . A . 206 LEU h 0 3079 1 1 1 1 29 GLY . A . 207 GLY i 0 3079 1 1 1 1 30 PHE . A . 208 PHE a 0 3079 1 1 1 1 31 HIS . A . 209 TYR c 0 3079 1 1 1 1 32 PRO . A . 210 PRO f 0 3079 1 1 1 1 33 SER . A . 211 ALA b 0 3079 1 1 1 1 34 ASP . A . 212 GLU d 0 3079 1 1 1 1 35 ILE . A . 213 ILE c 0 3079 1 1 1 1 36 GLU . A . 214 THR d 0 3079 1 1 1 1 37 VAL . A . 215 LEU d 0 3079 1 1 1 1 38 ASP . A . 216 THR d 0 3079 1 1 1 1 39 LEU . A . 217 TRP d 0 3079 1 1 1 1 40 LEU . A . 218 GLN e 0 3079 1 1 1 1 41 LYS . A . 219 ARG e 0 3079 1 1 1 1 42 ASN . A . 220 ASP h 0 3079 1 1 1 1 43 GLY . A . 221 GLY i 0 3079 1 1 1 1 44 GLU . A . 222 GLU a 0 3079 1 1 1 1 45 ARG . A . 229 GLU c 0 3079 1 1 1 1 46 ILE . A . 231 VAL d 0 3079 1 1 1 1 47 GLU . A . 232 GLU d 0 3079 1 1 1 1 48 LYS . A . 233 THR d 0 3079 1 1 1 1 49 VAL . A . 234 ARG d 0 3079 1 1 1 1 50 GLU . A . 235 PRO f 0 3079 1 1 1 1 51 HIS . A . 236 ALA k 0 3079 1 1 1 1 52 SER . A . 237 GLY n 0 3079 1 1 1 1 53 ASP . A . 238 ASP o 0 3079 1 1 1 1 54 LEU . A . 239 ARG p 0 3079 1 1 1 1 55 SER . A . 240 THR a 0 3079 1 1 1 1 56 PHE . A . 241 PHE c 0 3079 1 1 1 1 57 SER . A . 242 GLN d 0 3079 1 1 1 1 58 LYS . A . 243 LYS d 0 3079 1 1 1 1 59 ASP . A . . . . 0 3079 1 1 1 1 60 TRP . A . 244 TRP d 0 3079 1 1 1 1 61 SER . A . 245 ALA d 0 3079 1 1 1 1 62 PHE . A . 246 ALA d 0 3079 1 1 1 1 63 TYR . A . 247 VAL d 0 3079 1 1 1 1 64 LEU . A . 248 VAL d 0 3079 1 1 1 1 65 LEU . A . 249 VAL d 0 3079 1 1 1 1 66 TYR . A . . . . 0 3079 1 1 1 1 67 TYR . A . . . . 0 3079 1 1 1 1 68 THR . A . . . . 0 3079 1 1 1 1 69 GLU . A . . . . 0 3079 1 1 1 1 70 PHE . A . . . . 0 3079 1 1 1 1 71 THR . A . . . . 0 3079 1 1 1 1 72 PRO . A . 250 PRO e 0 3079 1 1 1 1 73 THR . A . 251 SER h 0 3079 1 1 1 1 74 GLU . A . 253 GLU l 0 3079 1 1 1 1 75 LYS . A . 254 GLU m 0 3079 1 1 1 1 76 ASP . A . 255 GLN m 0 3079 1 1 1 1 77 GLU . A . 256 ARG p 0 3079 1 1 1 1 78 TYR . A . 257 TYR c 0 3079 1 1 1 1 79 ALA . A . 258 THR c 0 3079 1 1 1 1 80 CYS . A . 259 CYS d 0 3079 1 1 1 1 81 ARG . A . 260 HIS d 0 3079 1 1 1 1 82 VAL . A . 261 VAL d 0 3079 1 1 1 1 83 ASN . A . 262 GLN d 0 3079 1 1 1 1 84 HIS . A . 263 HIS f 0 3079 1 1 1 1 85 VAL . A . 264 GLU k 0 3079 1 1 1 1 86 THR . A . 265 GLY b 0 3079 1 1 1 1 87 LEU . A . 266 LEU f 0 3079 1 1 1 1 88 SER . A . 267 PRO b 0 3079 1 1 1 1 89 GLN . A . 268 LYS d 0 3079 1 1 1 1 90 PRO . A . 269 PRO c 0 3079 1 1 1 1 91 LYS . A . 270 LEU d 0 3079 1 1 1 1 92 ILE . A . 271 THR d 0 3079 1 1 1 1 93 VAL . A . 272 LEU d 0 3079 1 1 1 1 94 LYS . A . 273 ARG d 0 3079 1 1 1 1 95 TRP . A . 274 TRP d 0 3079 1 1 1 1 96 ASP . A . 275 GLU d 0 3079 1 1 1 1 97 ARG . A . 276 PRO e 0 3079 1 1 1 1 98 ASP . A . 277 HIS . 0 3079 1 1 1 1 99 MET . A . . . . 0 3079 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1a1m_5593#B _PB_list.Queried_date 2015-07-01 _PB_list.Input_file_name pdb1a1m.ent _PB_list.Output_file_name bmr3079_1a1m_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr3079_1a1m_PB.str _PB_list.AA_seq_one_letter_code IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM _PB_list.PB_seq_code zzddddddddfbdcdehiacddddddehiacfbdcddddeehiacfbdcdddddddfkopacddddddddddfklccddddddfklmbacdddddfkzz _PB_list.PDB_ID 1A1M _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_work 0.205 _PB_list.PDBX_refine_ls_d_res_high 2.3 _PB_list.PDBX_refine_ls_d_res_low 15.0 _PB_list.Entry_ID 3079 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ILE . B . 1 ILE . 1 3079 2 1 1 1 2 GLN . B . 2 GLN . 1 3079 2 1 1 1 3 ARG . B . 3 ARG d 1 3079 2 1 1 1 4 THR . B . 4 THR d 1 3079 2 1 1 1 5 PRO . B . 5 PRO d 1 3079 2 1 1 1 6 LYS . B . 6 LYS d 1 3079 2 1 1 1 7 ILE . B . 7 ILE d 1 3079 2 1 1 1 8 GLN . B . 8 GLN d 1 3079 2 1 1 1 9 VAL . B . 9 VAL d 1 3079 2 1 1 1 10 TYR . B . 10 TYR d 1 3079 2 1 1 1 11 SER . B . 11 SER f 1 3079 2 1 1 1 12 ARG . B . 12 ARG b 1 3079 2 1 1 1 13 HIS . B . 13 HIS d 1 3079 2 1 1 1 14 PRO . B . 14 PRO c 1 3079 2 1 1 1 15 ALA . B . 15 ALA d 1 3079 2 1 1 1 16 GLU . B . 16 GLU e 1 3079 2 1 1 1 17 ASN . B . 17 ASN h 1 3079 2 1 1 1 18 GLY . B . 18 GLY i 1 3079 2 1 1 1 19 LYS . B . 19 LYS a 1 3079 2 1 1 1 20 SER . B . 20 SER c 1 3079 2 1 1 1 21 ASN . B . 21 ASN d 1 3079 2 1 1 1 22 PHE . B . 22 PHE d 1 3079 2 1 1 1 23 LEU . B . 23 LEU d 1 3079 2 1 1 1 24 ASN . B . 24 ASN d 1 3079 2 1 1 1 25 CYS . B . 25 CYS d 1 3079 2 1 1 1 26 TYR . B . 26 TYR d 1 3079 2 1 1 1 27 VAL . B . 27 VAL e 1 3079 2 1 1 1 28 SER . B . 28 SER h 1 3079 2 1 1 1 29 GLY . B . 29 GLY i 1 3079 2 1 1 1 30 PHE . B . 30 PHE a 1 3079 2 1 1 1 31 HIS . B . 31 HIS c 1 3079 2 1 1 1 32 PRO . B . 32 PRO f 1 3079 2 1 1 1 33 SER . B . 33 SER b 1 3079 2 1 1 1 34 ASP . B . 34 ASP d 1 3079 2 1 1 1 35 ILE . B . 35 ILE c 1 3079 2 1 1 1 36 GLU . B . 36 GLU d 1 3079 2 1 1 1 37 VAL . B . 37 VAL d 1 3079 2 1 1 1 38 ASP . B . 38 ASP d 1 3079 2 1 1 1 39 LEU . B . 39 LEU d 1 3079 2 1 1 1 40 LEU . B . 40 LEU e 1 3079 2 1 1 1 41 LYS . B . 41 LYS e 1 3079 2 1 1 1 42 ASN . B . 42 ASN h 1 3079 2 1 1 1 43 GLY . B . 43 GLY i 1 3079 2 1 1 1 44 GLU . B . 44 GLU a 1 3079 2 1 1 1 45 ARG . B . 45 ARG c 1 3079 2 1 1 1 46 ILE . B . 46 ILE f 1 3079 2 1 1 1 47 GLU . B . 47 GLU b 1 3079 2 1 1 1 48 LYS . B . 48 LYS d 1 3079 2 1 1 1 49 VAL . B . 49 VAL c 1 3079 2 1 1 1 50 GLU . B . 50 GLU d 1 3079 2 1 1 1 51 HIS . B . 51 HIS d 1 3079 2 1 1 1 52 SER . B . 52 SER d 1 3079 2 1 1 1 53 ASP . B . 53 ASP d 1 3079 2 1 1 1 54 LEU . B . 54 LEU d 1 3079 2 1 1 1 55 SER . B . 55 SER d 1 3079 2 1 1 1 56 PHE . B . 56 PHE d 1 3079 2 1 1 1 57 SER . B . 57 SER f 1 3079 2 1 1 1 58 LYS . B . 58 LYS k 1 3079 2 1 1 1 59 ASP . B . 59 ASP o 1 3079 2 1 1 1 60 TRP . B . 60 TRP p 1 3079 2 1 1 1 61 SER . B . 61 SER a 1 3079 2 1 1 1 62 PHE . B . 62 PHE c 1 3079 2 1 1 1 63 TYR . B . 63 TYR d 1 3079 2 1 1 1 64 LEU . B . 64 LEU d 1 3079 2 1 1 1 65 LEU . B . 65 LEU d 1 3079 2 1 1 1 66 TYR . B . 66 TYR d 1 3079 2 1 1 1 67 TYR . B . 67 TYR d 1 3079 2 1 1 1 68 THR . B . 68 THR d 1 3079 2 1 1 1 69 GLU . B . 69 GLU d 1 3079 2 1 1 1 70 PHE . B . 70 PHE d 1 3079 2 1 1 1 71 THR . B . 71 THR d 1 3079 2 1 1 1 72 PRO . B . 72 PRO d 1 3079 2 1 1 1 73 THR . B . 73 THR f 1 3079 2 1 1 1 74 GLU . B . 74 GLU k 1 3079 2 1 1 1 75 LYS . B . 75 LYS l 1 3079 2 1 1 1 76 ASP . B . 76 ASP c 1 3079 2 1 1 1 77 GLU . B . 77 GLU c 1 3079 2 1 1 1 78 TYR . B . 78 TYR d 1 3079 2 1 1 1 79 ALA . B . 79 ALA d 1 3079 2 1 1 1 80 CYS . B . 80 CYS d 1 3079 2 1 1 1 81 ARG . B . 81 ARG d 1 3079 2 1 1 1 82 VAL . B . 82 VAL d 1 3079 2 1 1 1 83 ASN . B . 83 ASN d 1 3079 2 1 1 1 84 HIS . B . 84 HIS f 1 3079 2 1 1 1 85 VAL . B . 85 VAL k 1 3079 2 1 1 1 86 THR . B . 86 THR l 1 3079 2 1 1 1 87 LEU . B . 87 LEU m 1 3079 2 1 1 1 88 SER . B . 88 SER b 1 3079 2 1 1 1 89 GLN . B . 89 GLN a 1 3079 2 1 1 1 90 PRO . B . 90 PRO c 1 3079 2 1 1 1 91 LYS . B . 91 LYS d 1 3079 2 1 1 1 92 ILE . B . 92 ILE d 1 3079 2 1 1 1 93 VAL . B . 93 VAL d 1 3079 2 1 1 1 94 LYS . B . 94 LYS d 1 3079 2 1 1 1 95 TRP . B . 95 TRP d 1 3079 2 1 1 1 96 ASP . B . 96 ASP f 1 3079 2 1 1 1 97 ARG . B . 97 ARG k 1 3079 2 1 1 1 98 ASP . B . 98 ASP . 1 3079 2 1 1 1 99 MET . B . 99 MET . 1 3079 2 stop_ save_