data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db3eba_9050#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3eba.ent _PB_list.Output_file_name bmr2542_3eba_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr2542_3eba_PB.str _PB_list.AA_seq_one_letter_code KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV _PB_list.PB_seq_code zzdfklmmmmmmmnopgopghiafklmmmmmmmmnoopakbccddfknopadedjkopafklmmcnhpaghiaolnopafklmmcfblklmmmmmmmmmmpmnlmmlpmklmmmmgopafklmmgonlzz _PB_list.PDB_ID 3EBA _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.255 _PB_list.PDBX_refine_ls_R_factor_R_work 0.211 _PB_list.PDBX_refine_ls_d_res_high 1.85 _PB_list.PDBX_refine_ls_d_res_low 14.82 _PB_list.Entry_ID 2542 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 LYS . B . 1 LYS . 1 2542 1 1 1 1 2 VAL . B . 2 VAL . 1 2542 1 1 1 1 3 PHE . B . 3 PHE d 1 2542 1 1 1 1 4 GLU . B . 4 GLU f 1 2542 1 1 1 1 5 ARG . B . 5 ARG k 1 2542 1 1 1 1 6 CYS . B . 6 CYS l 1 2542 1 1 1 1 7 GLU . B . 7 GLU m 1 2542 1 1 1 1 8 LEU . B . 8 LEU m 1 2542 1 1 1 1 9 ALA . B . 9 ALA m 1 2542 1 1 1 1 10 ARG . B . 10 ARG m 1 2542 1 1 1 1 11 THR . B . 11 THR m 1 2542 1 1 1 1 12 LEU . B . 12 LEU m 1 2542 1 1 1 1 13 LYS . B . 13 LYS m 1 2542 1 1 1 1 14 ARG . B . 14 ARG n 1 2542 1 1 1 1 15 LEU . B . 15 LEU o 1 2542 1 1 1 1 16 GLY . B . 16 GLY p 1 2542 1 1 1 1 17 MET . B . 17 MET g 1 2542 1 1 1 1 18 ASP . B . 18 ASP o 1 2542 1 1 1 1 19 GLY . B . 19 GLY p 1 2542 1 1 1 1 20 TYR . B . 20 TYR g 1 2542 1 1 1 1 21 ARG . B . 21 ARG h 1 2542 1 1 1 1 22 GLY . B . 22 GLY i 1 2542 1 1 1 1 23 ILE . B . 23 ILE a 1 2542 1 1 1 1 24 SER . B . 24 SER f 1 2542 1 1 1 1 25 LEU . B . 25 LEU k 1 2542 1 1 1 1 26 ALA . B . 26 ALA l 1 2542 1 1 1 1 27 ASN . B . 27 ASN m 1 2542 1 1 1 1 28 TRP . B . 28 TRP m 1 2542 1 1 1 1 29 MET . B . 29 MET m 1 2542 1 1 1 1 30 CYS . B . 30 CYS m 1 2542 1 1 1 1 31 LEU . B . 31 LEU m 1 2542 1 1 1 1 32 ALA . B . 32 ALA m 1 2542 1 1 1 1 33 LYS . B . 33 LYS m 1 2542 1 1 1 1 34 TRP . B . 34 TRP m 1 2542 1 1 1 1 35 GLU . B . 35 GLU n 1 2542 1 1 1 1 36 SER . B . 36 SER o 1 2542 1 1 1 1 37 GLY . B . 37 GLY o 1 2542 1 1 1 1 38 TYR . B . 38 TYR p 1 2542 1 1 1 1 39 ASN . B . 39 ASN a 1 2542 1 1 1 1 40 THR . B . 40 THR k 1 2542 1 1 1 1 41 ARG . B . 41 ARG b 1 2542 1 1 1 1 42 ALA . B . 42 ALA c 1 2542 1 1 1 1 43 THR . B . 43 THR c 1 2542 1 1 1 1 44 ASN . B . 44 ASN d 1 2542 1 1 1 1 45 TYR . B . 45 TYR d 1 2542 1 1 1 1 46 ASN . B . 46 ASN f 1 2542 1 1 1 1 47 ALA . B . 47 ALA k 1 2542 1 1 1 1 48 GLY . B . 48 GLY n 1 2542 1 1 1 1 49 ASP . B . 49 ASP o 1 2542 1 1 1 1 50 ARG . B . 50 ARG p 1 2542 1 1 1 1 51 SER . B . 51 SER a 1 2542 1 1 1 1 52 THR . B . 52 THR d 1 2542 1 1 1 1 53 ASP . B . 53 ASP e 1 2542 1 1 1 1 54 TYR . B . 54 TYR d 1 2542 1 1 1 1 55 GLY . B . 55 GLY j 1 2542 1 1 1 1 56 ILE . B . 56 ILE k 1 2542 1 1 1 1 57 PHE . B . 57 PHE o 1 2542 1 1 1 1 58 GLN . B . 58 GLN p 1 2542 1 1 1 1 59 ILE . B . 59 ILE a 1 2542 1 1 1 1 60 ASN . B . 60 ASN f 1 2542 1 1 1 1 61 SER . B . 61 SER k 1 2542 1 1 1 1 62 ARG . B . 62 ARG l 1 2542 1 1 1 1 63 TYR . B . 63 TYR m 1 2542 1 1 1 1 64 TRP . B . 64 TRP m 1 2542 1 1 1 1 65 CYS . B . 65 CYS c 1 2542 1 1 1 1 66 ASN . B . 66 ASN n 1 2542 1 1 1 1 67 ASP . B . 67 ASP h 1 2542 1 1 1 1 68 GLY . B . 68 GLY p 1 2542 1 1 1 1 69 LYS . B . 69 LYS a 1 2542 1 1 1 1 70 THR . B . 70 THR g 1 2542 1 1 1 1 71 PRO . B . 71 PRO h 1 2542 1 1 1 1 72 GLY . B . 72 GLY i 1 2542 1 1 1 1 73 ALA . B . 73 ALA a 1 2542 1 1 1 1 74 VAL . B . 74 VAL o 1 2542 1 1 1 1 75 ASN . B . 75 ASN l 1 2542 1 1 1 1 76 ALA . B . 76 ALA n 1 2542 1 1 1 1 77 CYS . B . 77 CYS o 1 2542 1 1 1 1 78 HIS . B . 78 HIS p 1 2542 1 1 1 1 79 LEU . B . 79 LEU a 1 2542 1 1 1 1 80 SER . B . 80 SER f 1 2542 1 1 1 1 81 CYS . B . 81 CYS k 1 2542 1 1 1 1 82 SER . B . 82 SER l 1 2542 1 1 1 1 83 ALA . B . 83 ALA m 1 2542 1 1 1 1 84 LEU . B . 84 LEU m 1 2542 1 1 1 1 85 LEU . B . 85 LEU c 1 2542 1 1 1 1 86 GLN . B . 86 GLN f 1 2542 1 1 1 1 87 ASP . B . 87 ASP b 1 2542 1 1 1 1 88 ASN . B . 88 ASN l 1 2542 1 1 1 1 89 ILE . B . 89 ILE k 1 2542 1 1 1 1 90 ALA . B . 90 ALA l 1 2542 1 1 1 1 91 ASP . B . 91 ASP m 1 2542 1 1 1 1 92 ALA . B . 92 ALA m 1 2542 1 1 1 1 93 VAL . B . 93 VAL m 1 2542 1 1 1 1 94 ALA . B . 94 ALA m 1 2542 1 1 1 1 95 CYS . B . 95 CYS m 1 2542 1 1 1 1 96 ALA . B . 96 ALA m 1 2542 1 1 1 1 97 LYS . B . 97 LYS m 1 2542 1 1 1 1 98 ARG . B . 98 ARG m 1 2542 1 1 1 1 99 VAL . B . 99 VAL m 1 2542 1 1 1 1 100 VAL . B . 100 VAL m 1 2542 1 1 1 1 101 ARG . B . 101 ARG p 1 2542 1 1 1 1 102 ASP . B . 102 ASP m 1 2542 1 1 1 1 103 PRO . B . 103 PRO n 1 2542 1 1 1 1 104 GLN . B . 104 GLN l 1 2542 1 1 1 1 105 GLY . B . 105 GLY m 1 2542 1 1 1 1 106 ILE . B . 106 ILE m 1 2542 1 1 1 1 107 ARG . B . 107 ARG l 1 2542 1 1 1 1 108 ALA . B . 108 ALA p 1 2542 1 1 1 1 109 TRP . B . 109 TRP m 1 2542 1 1 1 1 110 VAL . B . 110 VAL k 1 2542 1 1 1 1 111 ALA . B . 111 ALA l 1 2542 1 1 1 1 112 TRP . B . 112 TRP m 1 2542 1 1 1 1 113 ARG . B . 113 ARG m 1 2542 1 1 1 1 114 ASN . B . 114 ASN m 1 2542 1 1 1 1 115 ARG . B . 115 ARG m 1 2542 1 1 1 1 116 CYS . B . 116 CYS g 1 2542 1 1 1 1 117 GLN . B . 117 GLN o 1 2542 1 1 1 1 118 ASN . B . 118 ASN p 1 2542 1 1 1 1 119 ARG . B . 119 ARG a 1 2542 1 1 1 1 120 ASP . B . 120 ASP f 1 2542 1 1 1 1 121 VAL . B . 121 VAL k 1 2542 1 1 1 1 122 ARG . B . 122 ARG l 1 2542 1 1 1 1 123 GLN . B . 123 GLN m 1 2542 1 1 1 1 124 TYR . B . 124 TYR m 1 2542 1 1 1 1 125 VAL . B . 125 VAL g 1 2542 1 1 1 1 126 GLN . B . 126 GLN o 1 2542 1 1 1 1 127 GLY . B . 127 GLY n 1 2542 1 1 1 1 128 CYS . B . 128 CYS l 1 2542 1 1 1 1 129 GLY . B . 129 GLY . 1 2542 1 1 1 1 130 VAL . B . 130 VAL . 1 2542 1 stop_ save_