data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db3gxe_9205#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3gxe.ent _PB_list.Output_file_name bmr15986_3gxe_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15986_3gxe_PB.str _PB_list.AA_seq_one_letter_code DQCIVDDITYNVQDTFHKKHEEGHMLNCTCFGQGRGRWKCDPVDQCQDSETGTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQPLQT _PB_list.PB_seq_code zzdeehiacdehiacddddfklpacddddeknonopacdddddddddfklopacdehiacdddeehiacddddeknonopacdddddzz _PB_list.PDB_ID 3GXE _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.271 _PB_list.PDBX_refine_ls_R_factor_R_work 0.219 _PB_list.PDBX_refine_ls_d_res_high 2.600 _PB_list.PDBX_refine_ls_d_res_low 46.648 _PB_list.Entry_ID 15986 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ASP . B . 1 ASP . 1 15986 1 1 1 1 2 GLN . B . 2 GLN . 1 15986 1 1 1 1 3 CYS . B . 3 CYS d 1 15986 1 1 1 1 4 ILE . B . 4 ILE e 1 15986 1 1 1 1 5 VAL . B . 5 VAL e 1 15986 1 1 1 1 6 ASP . B . 6 ASP h 1 15986 1 1 1 1 7 ASP . B . 7 ASP i 1 15986 1 1 1 1 8 ILE . B . 8 ILE a 1 15986 1 1 1 1 9 THR . B . 9 THR c 1 15986 1 1 1 1 10 TYR . B . 10 TYR d 1 15986 1 1 1 1 11 ASN . B . 11 ASN e 1 15986 1 1 1 1 12 VAL . B . 12 VAL h 1 15986 1 1 1 1 13 GLN . B . 13 GLN i 1 15986 1 1 1 1 14 ASP . B . 14 ASP a 1 15986 1 1 1 1 15 THR . B . 15 THR c 1 15986 1 1 1 1 16 PHE . B . 16 PHE d 1 15986 1 1 1 1 17 HIS . B . 17 HIS d 1 15986 1 1 1 1 18 LYS . B . 18 LYS d 1 15986 1 1 1 1 19 LYS . B . 19 LYS d 1 15986 1 1 1 1 20 HIS . B . 20 HIS f 1 15986 1 1 1 1 21 GLU . B . 21 GLU k 1 15986 1 1 1 1 22 GLU . B . 22 GLU l 1 15986 1 1 1 1 23 GLY . B . 23 GLY p 1 15986 1 1 1 1 24 HIS . B . 24 HIS a 1 15986 1 1 1 1 25 MET . B . 25 MET c 1 15986 1 1 1 1 26 LEU . B . 26 LEU d 1 15986 1 1 1 1 27 ASN . B . 27 ASN d 1 15986 1 1 1 1 28 CYS . B . 28 CYS d 1 15986 1 1 1 1 29 THR . B . 29 THR d 1 15986 1 1 1 1 30 CYS . B . 30 CYS e 1 15986 1 1 1 1 31 PHE . B . 31 PHE k 1 15986 1 1 1 1 32 GLY . B . 32 GLY n 1 15986 1 1 1 1 33 GLN . B . 33 GLN o 1 15986 1 1 1 1 34 GLY . B . 34 GLY n 1 15986 1 1 1 1 35 ARG . B . 35 ARG o 1 15986 1 1 1 1 36 GLY . B . 36 GLY p 1 15986 1 1 1 1 37 ARG . B . 37 ARG a 1 15986 1 1 1 1 38 TRP . B . 38 TRP c 1 15986 1 1 1 1 39 LYS . B . 39 LYS d 1 15986 1 1 1 1 40 CYS . B . 40 CYS d 1 15986 1 1 1 1 41 ASP . B . 41 ASP d 1 15986 1 1 1 1 42 PRO . B . 42 PRO d 1 15986 1 1 1 1 43 VAL . B . 43 VAL d 1 15986 1 1 1 1 44 ASP . B . 44 ASP d 1 15986 1 1 1 1 45 GLN . B . 45 GLN d 1 15986 1 1 1 1 46 CYS . B . 46 CYS d 1 15986 1 1 1 1 47 GLN . B . 47 GLN d 1 15986 1 1 1 1 48 ASP . B . 48 ASP f 1 15986 1 1 1 1 49 SER . B . 49 SER k 1 15986 1 1 1 1 50 GLU . B . 50 GLU l 1 15986 1 1 1 1 51 THR . B . 51 THR o 1 15986 1 1 1 1 52 GLY . B . 52 GLY p 1 15986 1 1 1 1 53 THR . B . 53 THR a 1 15986 1 1 1 1 54 PHE . B . 54 PHE c 1 15986 1 1 1 1 55 TYR . B . 55 TYR d 1 15986 1 1 1 1 56 GLN . B . 56 GLN e 1 15986 1 1 1 1 57 ILE . B . 57 ILE h 1 15986 1 1 1 1 58 GLY . B . 58 GLY i 1 15986 1 1 1 1 59 ASP . B . 59 ASP a 1 15986 1 1 1 1 60 SER . B . 60 SER c 1 15986 1 1 1 1 61 TRP . B . 61 TRP d 1 15986 1 1 1 1 62 GLU . B . 62 GLU d 1 15986 1 1 1 1 63 LYS . B . 63 LYS d 1 15986 1 1 1 1 64 TYR . B . 64 TYR e 1 15986 1 1 1 1 65 VAL . B . 65 VAL e 1 15986 1 1 1 1 66 HIS . B . 66 HIS h 1 15986 1 1 1 1 67 GLY . B . 67 GLY i 1 15986 1 1 1 1 68 VAL . B . 68 VAL a 1 15986 1 1 1 1 69 ARG . B . 69 ARG c 1 15986 1 1 1 1 70 TYR . B . 70 TYR d 1 15986 1 1 1 1 71 GLN . B . 71 GLN d 1 15986 1 1 1 1 72 CYS . B . 72 CYS d 1 15986 1 1 1 1 73 TYR . B . 73 TYR d 1 15986 1 1 1 1 74 CYS . B . 74 CYS e 1 15986 1 1 1 1 75 TYR . B . 75 TYR k 1 15986 1 1 1 1 76 GLY . B . 76 GLY n 1 15986 1 1 1 1 77 ARG . B . 77 ARG o 1 15986 1 1 1 1 78 GLY . B . 78 GLY n 1 15986 1 1 1 1 79 ILE . B . 79 ILE o 1 15986 1 1 1 1 80 GLY . B . 80 GLY p 1 15986 1 1 1 1 81 GLU . B . 81 GLU a 1 15986 1 1 1 1 82 TRP . B . 82 TRP c 1 15986 1 1 1 1 83 HIS . B . 83 HIS d 1 15986 1 1 1 1 84 CYS . B . 84 CYS d 1 15986 1 1 1 1 85 GLN . B . 85 GLN d 1 15986 1 1 1 1 86 PRO . B . 86 PRO d 1 15986 1 1 1 1 87 LEU . B . 87 LEU d 1 15986 1 1 1 1 88 GLN . B . 88 GLN . 1 15986 1 1 1 1 89 THR . B . 89 THR . 1 15986 1 1 1 1 90 TYR . B . 90 TYR . 1 15986 1 1 1 1 91 PRO . B . 91 PRO . 1 15986 1 1 1 1 92 SER . B . 92 SER . 1 15986 1 1 1 1 93 SER . B . 93 SER . 1 15986 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db3gxe_9205#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3gxe.ent _PB_list.Output_file_name bmr15986_3gxe_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15986_3gxe_PB.str _PB_list.AA_seq_one_letter_code DQCIVDDITYNVQDTFHKKHEEGHMLNCTCFGQGRGRWKCDPVDQCQDSETGTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQPL _PB_list.PB_seq_code zzdehjbccdehiacddddfklpacddddeknonopacdddddddddfklopacdehiacdddeehiacddddeklonopacddezz _PB_list.PDB_ID 3GXE _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.271 _PB_list.PDBX_refine_ls_R_factor_R_work 0.219 _PB_list.PDBX_refine_ls_d_res_high 2.600 _PB_list.PDBX_refine_ls_d_res_low 46.648 _PB_list.Entry_ID 15986 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ASP . A . 1 ASP . 1 15986 2 1 1 1 2 GLN . A . 2 GLN . 1 15986 2 1 1 1 3 CYS . A . 3 CYS d 1 15986 2 1 1 1 4 ILE . A . 4 ILE e 1 15986 2 1 1 1 5 VAL . A . 5 VAL h 1 15986 2 1 1 1 6 ASP . A . 6 ASP j 1 15986 2 1 1 1 7 ASP . A . 7 ASP b 1 15986 2 1 1 1 8 ILE . A . 8 ILE c 1 15986 2 1 1 1 9 THR . A . 9 THR c 1 15986 2 1 1 1 10 TYR . A . 10 TYR d 1 15986 2 1 1 1 11 ASN . A . 11 ASN e 1 15986 2 1 1 1 12 VAL . A . 12 VAL h 1 15986 2 1 1 1 13 GLN . A . 13 GLN i 1 15986 2 1 1 1 14 ASP . A . 14 ASP a 1 15986 2 1 1 1 15 THR . A . 15 THR c 1 15986 2 1 1 1 16 PHE . A . 16 PHE d 1 15986 2 1 1 1 17 HIS . A . 17 HIS d 1 15986 2 1 1 1 18 LYS . A . 18 LYS d 1 15986 2 1 1 1 19 LYS . A . 19 LYS d 1 15986 2 1 1 1 20 HIS . A . 20 HIS f 1 15986 2 1 1 1 21 GLU . A . 21 GLU k 1 15986 2 1 1 1 22 GLU . A . 22 GLU l 1 15986 2 1 1 1 23 GLY . A . 23 GLY p 1 15986 2 1 1 1 24 HIS . A . 24 HIS a 1 15986 2 1 1 1 25 MET . A . 25 MET c 1 15986 2 1 1 1 26 LEU . A . 26 LEU d 1 15986 2 1 1 1 27 ASN . A . 27 ASN d 1 15986 2 1 1 1 28 CYS . A . 28 CYS d 1 15986 2 1 1 1 29 THR . A . 29 THR d 1 15986 2 1 1 1 30 CYS . A . 30 CYS e 1 15986 2 1 1 1 31 PHE . A . 31 PHE k 1 15986 2 1 1 1 32 GLY . A . 32 GLY n 1 15986 2 1 1 1 33 GLN . A . 33 GLN o 1 15986 2 1 1 1 34 GLY . A . 34 GLY n 1 15986 2 1 1 1 35 ARG . A . 35 ARG o 1 15986 2 1 1 1 36 GLY . A . 36 GLY p 1 15986 2 1 1 1 37 ARG . A . 37 ARG a 1 15986 2 1 1 1 38 TRP . A . 38 TRP c 1 15986 2 1 1 1 39 LYS . A . 39 LYS d 1 15986 2 1 1 1 40 CYS . A . 40 CYS d 1 15986 2 1 1 1 41 ASP . A . 41 ASP d 1 15986 2 1 1 1 42 PRO . A . 42 PRO d 1 15986 2 1 1 1 43 VAL . A . 43 VAL d 1 15986 2 1 1 1 44 ASP . A . 44 ASP d 1 15986 2 1 1 1 45 GLN . A . 45 GLN d 1 15986 2 1 1 1 46 CYS . A . 46 CYS d 1 15986 2 1 1 1 47 GLN . A . 47 GLN d 1 15986 2 1 1 1 48 ASP . A . 48 ASP f 1 15986 2 1 1 1 49 SER . A . 49 SER k 1 15986 2 1 1 1 50 GLU . A . 50 GLU l 1 15986 2 1 1 1 51 THR . A . 51 THR o 1 15986 2 1 1 1 52 GLY . A . 52 GLY p 1 15986 2 1 1 1 53 THR . A . 53 THR a 1 15986 2 1 1 1 54 PHE . A . 54 PHE c 1 15986 2 1 1 1 55 TYR . A . 55 TYR d 1 15986 2 1 1 1 56 GLN . A . 56 GLN e 1 15986 2 1 1 1 57 ILE . A . 57 ILE h 1 15986 2 1 1 1 58 GLY . A . 58 GLY i 1 15986 2 1 1 1 59 ASP . A . 59 ASP a 1 15986 2 1 1 1 60 SER . A . 60 SER c 1 15986 2 1 1 1 61 TRP . A . 61 TRP d 1 15986 2 1 1 1 62 GLU . A . 62 GLU d 1 15986 2 1 1 1 63 LYS . A . 63 LYS d 1 15986 2 1 1 1 64 TYR . A . 64 TYR e 1 15986 2 1 1 1 65 VAL . A . 65 VAL e 1 15986 2 1 1 1 66 HIS . A . 66 HIS h 1 15986 2 1 1 1 67 GLY . A . 67 GLY i 1 15986 2 1 1 1 68 VAL . A . 68 VAL a 1 15986 2 1 1 1 69 ARG . A . 69 ARG c 1 15986 2 1 1 1 70 TYR . A . 70 TYR d 1 15986 2 1 1 1 71 GLN . A . 71 GLN d 1 15986 2 1 1 1 72 CYS . A . 72 CYS d 1 15986 2 1 1 1 73 TYR . A . 73 TYR d 1 15986 2 1 1 1 74 CYS . A . 74 CYS e 1 15986 2 1 1 1 75 TYR . A . 75 TYR k 1 15986 2 1 1 1 76 GLY . A . 76 GLY l 1 15986 2 1 1 1 77 ARG . A . 77 ARG o 1 15986 2 1 1 1 78 GLY . A . 78 GLY n 1 15986 2 1 1 1 79 ILE . A . 79 ILE o 1 15986 2 1 1 1 80 GLY . A . 80 GLY p 1 15986 2 1 1 1 81 GLU . A . 81 GLU a 1 15986 2 1 1 1 82 TRP . A . 82 TRP c 1 15986 2 1 1 1 83 HIS . A . 83 HIS d 1 15986 2 1 1 1 84 CYS . A . 84 CYS d 1 15986 2 1 1 1 85 GLN . A . 85 GLN e 1 15986 2 1 1 1 86 PRO . A . 86 PRO . 1 15986 2 1 1 1 87 LEU . A . 87 LEU . 1 15986 2 1 1 1 88 GLN . A . 88 GLN . 1 15986 2 1 1 1 89 THR . A . 89 THR . 1 15986 2 1 1 1 90 TYR . A . 90 TYR . 1 15986 2 1 1 1 91 PRO . A . 91 PRO . 1 15986 2 1 1 1 92 SER . A . 92 SER . 1 15986 2 1 1 1 93 SER . A . 93 SER . 1 15986 2 stop_ save_