data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2rky_8097#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2rky.ent _PB_list.Output_file_name bmr15758_2rky_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15758_2rky_PB.str _PB_list.AA_seq_one_letter_code AEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCER _PB_list.PB_seq_code zzcddfknopacdehiacdddeehlaccddddeknonopacddfklbccdfklopacdehiacddddfeopacddddekjonopacddzz _PB_list.PDB_ID 2RKY _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.216 _PB_list.PDBX_refine_ls_R_factor_R_work 0.181 _PB_list.PDBX_refine_ls_d_res_high 1.800 _PB_list.PDBX_refine_ls_d_res_low 30.510 _PB_list.Entry_ID 15758 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . A . 1 ALA . 1 15758 1 1 1 1 2 GLU . A . 2 GLU . 1 15758 1 1 1 1 3 LYS . A . 3 LYS c 1 15758 1 1 1 1 4 CYS . A . 4 CYS d 1 15758 1 1 1 1 5 PHE . A . 5 PHE d 1 15758 1 1 1 1 6 ASP . A . 6 ASP f 1 15758 1 1 1 1 7 HIS . A . 7 HIS k 1 15758 1 1 1 1 8 ALA . A . 8 ALA n 1 15758 1 1 1 1 9 ALA . A . 9 ALA o 1 15758 1 1 1 1 10 GLY . A . 10 GLY p 1 15758 1 1 1 1 11 THR . A . 11 THR a 1 15758 1 1 1 1 12 SER . A . 12 SER c 1 15758 1 1 1 1 13 TYR . A . 13 TYR d 1 15758 1 1 1 1 14 VAL . A . 14 VAL e 1 15758 1 1 1 1 15 VAL . A . 15 VAL h 1 15758 1 1 1 1 16 GLY . A . 16 GLY i 1 15758 1 1 1 1 17 GLU . A . 17 GLU a 1 15758 1 1 1 1 18 THR . A . 18 THR c 1 15758 1 1 1 1 19 TRP . A . 19 TRP d 1 15758 1 1 1 1 20 GLU . A . 20 GLU d 1 15758 1 1 1 1 21 LYS . A . 21 LYS d 1 15758 1 1 1 1 22 PRO . A . 22 PRO e 1 15758 1 1 1 1 23 TYR . A . 23 TYR e 1 15758 1 1 1 1 24 GLN . A . 24 GLN h 1 15758 1 1 1 1 25 GLY . A . 25 GLY l 1 15758 1 1 1 1 26 TRP . A . 26 TRP a 1 15758 1 1 1 1 27 MET . A . 27 MET c 1 15758 1 1 1 1 28 MET . A . 28 MET c 1 15758 1 1 1 1 29 VAL . A . 29 VAL d 1 15758 1 1 1 1 30 ASP . A . 30 ASP d 1 15758 1 1 1 1 31 CYS . A . 31 CYS d 1 15758 1 1 1 1 32 THR . A . 32 THR d 1 15758 1 1 1 1 33 CYS . A . 33 CYS e 1 15758 1 1 1 1 34 LEU . A . 34 LEU k 1 15758 1 1 1 1 35 GLY . A . 35 GLY n 1 15758 1 1 1 1 36 GLU . A . 36 GLU o 1 15758 1 1 1 1 37 GLY . A . 37 GLY n 1 15758 1 1 1 1 38 SER . A . 38 SER o 1 15758 1 1 1 1 39 GLY . A . 39 GLY p 1 15758 1 1 1 1 40 ARG . A . 40 ARG a 1 15758 1 1 1 1 41 ILE . A . 41 ILE c 1 15758 1 1 1 1 42 THR . A . 42 THR d 1 15758 1 1 1 1 43 CYS . A . 43 CYS d 1 15758 1 1 1 1 44 THR . A . 44 THR f 1 15758 1 1 1 1 45 SER . A . 45 SER k 1 15758 1 1 1 1 46 ARG . A . 46 ARG l 1 15758 1 1 1 1 47 ASN . A . 47 ASN b 1 15758 1 1 1 1 48 ARG . A . 48 ARG c 1 15758 1 1 1 1 49 CYS . A . 49 CYS c 1 15758 1 1 1 1 50 ASN . A . 50 ASN d 1 15758 1 1 1 1 51 ASP . A . 51 ASP f 1 15758 1 1 1 1 52 GLN . A . 52 GLN k 1 15758 1 1 1 1 53 ASP . A . 53 ASP l 1 15758 1 1 1 1 54 THR . A . 54 THR o 1 15758 1 1 1 1 55 ARG . A . 55 ARG p 1 15758 1 1 1 1 56 THR . A . 56 THR a 1 15758 1 1 1 1 57 SER . A . 57 SER c 1 15758 1 1 1 1 58 TYR . A . 58 TYR d 1 15758 1 1 1 1 59 ARG . A . 59 ARG e 1 15758 1 1 1 1 60 ILE . A . 60 ILE h 1 15758 1 1 1 1 61 GLY . A . 61 GLY i 1 15758 1 1 1 1 62 ASP . A . 62 ASP a 1 15758 1 1 1 1 63 THR . A . 63 THR c 1 15758 1 1 1 1 64 TRP . A . 64 TRP d 1 15758 1 1 1 1 65 SER . A . 65 SER d 1 15758 1 1 1 1 66 LYS . A . 66 LYS d 1 15758 1 1 1 1 67 LYS . A . 67 LYS d 1 15758 1 1 1 1 68 ASP . A . 68 ASP f 1 15758 1 1 1 1 69 ASN . A . 69 ASN e 1 15758 1 1 1 1 70 ARG . A . 70 ARG o 1 15758 1 1 1 1 71 GLY . A . 71 GLY p 1 15758 1 1 1 1 72 ASN . A . 72 ASN a 1 15758 1 1 1 1 73 LEU . A . 73 LEU c 1 15758 1 1 1 1 74 LEU . A . 74 LEU d 1 15758 1 1 1 1 75 GLN . A . 75 GLN d 1 15758 1 1 1 1 76 CYS . A . 76 CYS d 1 15758 1 1 1 1 77 ILE . A . 77 ILE d 1 15758 1 1 1 1 78 CYS . A . 78 CYS e 1 15758 1 1 1 1 79 THR . A . 79 THR k 1 15758 1 1 1 1 80 GLY . A . 80 GLY j 1 15758 1 1 1 1 81 ASN . A . 81 ASN o 1 15758 1 1 1 1 82 GLY . A . 82 GLY n 1 15758 1 1 1 1 83 ARG . A . 83 ARG o 1 15758 1 1 1 1 84 GLY . A . 84 GLY p 1 15758 1 1 1 1 85 GLU . A . 85 GLU a 1 15758 1 1 1 1 86 TRP . A . 86 TRP c 1 15758 1 1 1 1 87 LYS . A . 87 LYS d 1 15758 1 1 1 1 88 CYS . A . 88 CYS d 1 15758 1 1 1 1 89 GLU . A . 89 GLU . 1 15758 1 1 1 1 90 ARG . A . 90 ARG . 1 15758 1 1 1 1 91 HIS . A . 91 HIS . 1 15758 1 1 1 1 92 THR . A . 92 THR . 1 15758 1 1 1 1 93 SER . A . 93 SER . 1 15758 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db2rky_8097#C _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2rky.ent _PB_list.Output_file_name bmr15758_2rky_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15758_2rky_PB.str _PB_list.AA_seq_one_letter_code AEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHT _PB_list.PB_seq_code zzcddfklopacdehiacdddeehjaccddddeknonopacddfklcccdfklopacdehiacddddfeopacddddeklonopacddddzz _PB_list.PDB_ID 2RKY _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.216 _PB_list.PDBX_refine_ls_R_factor_R_work 0.181 _PB_list.PDBX_refine_ls_d_res_high 1.800 _PB_list.PDBX_refine_ls_d_res_low 30.510 _PB_list.Entry_ID 15758 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . C . 1 ALA . 1 15758 2 1 1 1 2 GLU . C . 2 GLU . 1 15758 2 1 1 1 3 LYS . C . 3 LYS c 1 15758 2 1 1 1 4 CYS . C . 4 CYS d 1 15758 2 1 1 1 5 PHE . C . 5 PHE d 1 15758 2 1 1 1 6 ASP . C . 6 ASP f 1 15758 2 1 1 1 7 HIS . C . 7 HIS k 1 15758 2 1 1 1 8 ALA . C . 8 ALA l 1 15758 2 1 1 1 9 ALA . C . 9 ALA o 1 15758 2 1 1 1 10 GLY . C . 10 GLY p 1 15758 2 1 1 1 11 THR . C . 11 THR a 1 15758 2 1 1 1 12 SER . C . 12 SER c 1 15758 2 1 1 1 13 TYR . C . 13 TYR d 1 15758 2 1 1 1 14 VAL . C . 14 VAL e 1 15758 2 1 1 1 15 VAL . C . 15 VAL h 1 15758 2 1 1 1 16 GLY . C . 16 GLY i 1 15758 2 1 1 1 17 GLU . C . 17 GLU a 1 15758 2 1 1 1 18 THR . C . 18 THR c 1 15758 2 1 1 1 19 TRP . C . 19 TRP d 1 15758 2 1 1 1 20 GLU . C . 20 GLU d 1 15758 2 1 1 1 21 LYS . C . 21 LYS d 1 15758 2 1 1 1 22 PRO . C . 22 PRO e 1 15758 2 1 1 1 23 TYR . C . 23 TYR e 1 15758 2 1 1 1 24 GLN . C . 24 GLN h 1 15758 2 1 1 1 25 GLY . C . 25 GLY j 1 15758 2 1 1 1 26 TRP . C . 26 TRP a 1 15758 2 1 1 1 27 MET . C . 27 MET c 1 15758 2 1 1 1 28 MET . C . 28 MET c 1 15758 2 1 1 1 29 VAL . C . 29 VAL d 1 15758 2 1 1 1 30 ASP . C . 30 ASP d 1 15758 2 1 1 1 31 CYS . C . 31 CYS d 1 15758 2 1 1 1 32 THR . C . 32 THR d 1 15758 2 1 1 1 33 CYS . C . 33 CYS e 1 15758 2 1 1 1 34 LEU . C . 34 LEU k 1 15758 2 1 1 1 35 GLY . C . 35 GLY n 1 15758 2 1 1 1 36 GLU . C . 36 GLU o 1 15758 2 1 1 1 37 GLY . C . 37 GLY n 1 15758 2 1 1 1 38 SER . C . 38 SER o 1 15758 2 1 1 1 39 GLY . C . 39 GLY p 1 15758 2 1 1 1 40 ARG . C . 40 ARG a 1 15758 2 1 1 1 41 ILE . C . 41 ILE c 1 15758 2 1 1 1 42 THR . C . 42 THR d 1 15758 2 1 1 1 43 CYS . C . 43 CYS d 1 15758 2 1 1 1 44 THR . C . 44 THR f 1 15758 2 1 1 1 45 SER . C . 45 SER k 1 15758 2 1 1 1 46 ARG . C . 46 ARG l 1 15758 2 1 1 1 47 ASN . C . 47 ASN c 1 15758 2 1 1 1 48 ARG . C . 48 ARG c 1 15758 2 1 1 1 49 CYS . C . 49 CYS c 1 15758 2 1 1 1 50 ASN . C . 50 ASN d 1 15758 2 1 1 1 51 ASP . C . 51 ASP f 1 15758 2 1 1 1 52 GLN . C . 52 GLN k 1 15758 2 1 1 1 53 ASP . C . 53 ASP l 1 15758 2 1 1 1 54 THR . C . 54 THR o 1 15758 2 1 1 1 55 ARG . C . 55 ARG p 1 15758 2 1 1 1 56 THR . C . 56 THR a 1 15758 2 1 1 1 57 SER . C . 57 SER c 1 15758 2 1 1 1 58 TYR . C . 58 TYR d 1 15758 2 1 1 1 59 ARG . C . 59 ARG e 1 15758 2 1 1 1 60 ILE . C . 60 ILE h 1 15758 2 1 1 1 61 GLY . C . 61 GLY i 1 15758 2 1 1 1 62 ASP . C . 62 ASP a 1 15758 2 1 1 1 63 THR . C . 63 THR c 1 15758 2 1 1 1 64 TRP . C . 64 TRP d 1 15758 2 1 1 1 65 SER . C . 65 SER d 1 15758 2 1 1 1 66 LYS . C . 66 LYS d 1 15758 2 1 1 1 67 LYS . C . 67 LYS d 1 15758 2 1 1 1 68 ASP . C . 68 ASP f 1 15758 2 1 1 1 69 ASN . C . 69 ASN e 1 15758 2 1 1 1 70 ARG . C . 70 ARG o 1 15758 2 1 1 1 71 GLY . C . 71 GLY p 1 15758 2 1 1 1 72 ASN . C . 72 ASN a 1 15758 2 1 1 1 73 LEU . C . 73 LEU c 1 15758 2 1 1 1 74 LEU . C . 74 LEU d 1 15758 2 1 1 1 75 GLN . C . 75 GLN d 1 15758 2 1 1 1 76 CYS . C . 76 CYS d 1 15758 2 1 1 1 77 ILE . C . 77 ILE d 1 15758 2 1 1 1 78 CYS . C . 78 CYS e 1 15758 2 1 1 1 79 THR . C . 79 THR k 1 15758 2 1 1 1 80 GLY . C . 80 GLY l 1 15758 2 1 1 1 81 ASN . C . 81 ASN o 1 15758 2 1 1 1 82 GLY . C . 82 GLY n 1 15758 2 1 1 1 83 ARG . C . 83 ARG o 1 15758 2 1 1 1 84 GLY . C . 84 GLY p 1 15758 2 1 1 1 85 GLU . C . 85 GLU a 1 15758 2 1 1 1 86 TRP . C . 86 TRP c 1 15758 2 1 1 1 87 LYS . C . 87 LYS d 1 15758 2 1 1 1 88 CYS . C . 88 CYS d 1 15758 2 1 1 1 89 GLU . C . 89 GLU d 1 15758 2 1 1 1 90 ARG . C . 90 ARG d 1 15758 2 1 1 1 91 HIS . C . 91 HIS . 1 15758 2 1 1 1 92 THR . C . 92 THR . 1 15758 2 1 1 1 93 SER . C . 93 SER . 1 15758 2 stop_ save_