data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1bex_5731#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1bex.ent _PB_list.Output_file_name bmr1217_1bex_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr1217_1bex_PB.str _PB_list.AA_seq_one_letter_code AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK _PB_list.PB_seq_code zzbdcddddfkopafbfbdcddfklmbdcdddddedjbdfklmpccdddddfklmmmmmmmmmmnojkloppaehiaklmbdcddddehiacdddddfklpcehiacddddfbehklmmmgcddddzz _PB_list.PDB_ID 1BEX _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.289 _PB_list.PDBX_refine_ls_R_factor_R_work 0.209 _PB_list.PDBX_refine_ls_d_res_high 2.3 _PB_list.PDBX_refine_ls_d_res_low 20.0 _PB_list.Entry_ID 1217 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . A . 1 ALA . 1 1217 1 1 1 1 2 GLU . A . 2 GLU . 1 1217 1 1 1 1 3 CYS . A . 3 CYS b 1 1217 1 1 1 1 4 SER . A . 4 SER d 1 1217 1 1 1 1 5 VAL . A . 5 VAL c 1 1217 1 1 1 1 6 ASP . A . 6 ASP d 1 1217 1 1 1 1 7 ILE . A . 7 ILE d 1 1217 1 1 1 1 8 GLN . A . 8 GLN d 1 1217 1 1 1 1 9 GLY . A . 9 GLY d 1 1217 1 1 1 1 10 ASN . A . 10 ASN f 1 1217 1 1 1 1 11 ASP . A . 11 ASP k 1 1217 1 1 1 1 12 GLN . A . 12 GLN o 1 1217 1 1 1 1 13 MET . A . 13 MET p 1 1217 1 1 1 1 14 GLN . A . 14 GLN a 1 1217 1 1 1 1 15 PHE . A . 15 PHE f 1 1217 1 1 1 1 16 ASN . A . 16 ASN b 1 1217 1 1 1 1 17 THR . A . 17 THR f 1 1217 1 1 1 1 18 ASN . A . 18 ASN b 1 1217 1 1 1 1 19 ALA . A . 19 ALA d 1 1217 1 1 1 1 20 ILE . A . 20 ILE c 1 1217 1 1 1 1 21 THR . A . 21 THR d 1 1217 1 1 1 1 22 VAL . A . 22 VAL d 1 1217 1 1 1 1 23 ASP . A . 23 ASP f 1 1217 1 1 1 1 24 LYS . A . 24 LYS k 1 1217 1 1 1 1 25 SER . A . 25 SER l 1 1217 1 1 1 1 26 CYS . A . 26 CYS m 1 1217 1 1 1 1 27 LYS . A . 27 LYS b 1 1217 1 1 1 1 28 GLN . A . 28 GLN d 1 1217 1 1 1 1 29 PHE . A . 29 PHE c 1 1217 1 1 1 1 30 THR . A . 30 THR d 1 1217 1 1 1 1 31 VAL . A . 31 VAL d 1 1217 1 1 1 1 32 ASN . A . 32 ASN d 1 1217 1 1 1 1 33 LEU . A . 33 LEU d 1 1217 1 1 1 1 34 SER . A . 34 SER d 1 1217 1 1 1 1 35 HIS . A . 35 HIS e 1 1217 1 1 1 1 36 PRO . A . 36 PRO d 1 1217 1 1 1 1 37 GLY . A . 37 GLY j 1 1217 1 1 1 1 38 ASN . A . 38 ASN b 1 1217 1 1 1 1 39 LEU . A . 39 LEU d 1 1217 1 1 1 1 40 PRO . A . 40 PRO f 1 1217 1 1 1 1 41 LYS . A . 41 LYS k 1 1217 1 1 1 1 42 ASN . A . 42 ASN l 1 1217 1 1 1 1 43 VAL . A . 43 VAL m 1 1217 1 1 1 1 44 MET . A . 44 MET p 1 1217 1 1 1 1 45 GLY . A . 45 GLY c 1 1217 1 1 1 1 46 HIS . A . 46 HIS c 1 1217 1 1 1 1 47 ASN . A . 47 ASN d 1 1217 1 1 1 1 48 TRP . A . 48 TRP d 1 1217 1 1 1 1 49 VAL . A . 49 VAL d 1 1217 1 1 1 1 50 LEU . A . 50 LEU d 1 1217 1 1 1 1 51 SER . A . 51 SER d 1 1217 1 1 1 1 52 THR . A . 52 THR f 1 1217 1 1 1 1 53 ALA . A . 53 ALA k 1 1217 1 1 1 1 54 ALA . A . 54 ALA l 1 1217 1 1 1 1 55 ASP . A . 55 ASP m 1 1217 1 1 1 1 56 MET . A . 56 MET m 1 1217 1 1 1 1 57 GLN . A . 57 GLN m 1 1217 1 1 1 1 58 GLY . A . 58 GLY m 1 1217 1 1 1 1 59 VAL . A . 59 VAL m 1 1217 1 1 1 1 60 VAL . A . 60 VAL m 1 1217 1 1 1 1 61 THR . A . 61 THR m 1 1217 1 1 1 1 62 ASP . A . 62 ASP m 1 1217 1 1 1 1 63 GLY . A . 63 GLY m 1 1217 1 1 1 1 64 MET . A . 64 MET m 1 1217 1 1 1 1 65 ALA . A . 65 ALA n 1 1217 1 1 1 1 66 SER . A . 66 SER o 1 1217 1 1 1 1 67 GLY . A . 67 GLY j 1 1217 1 1 1 1 68 LEU . A . 68 LEU k 1 1217 1 1 1 1 69 ASP . A . 69 ASP l 1 1217 1 1 1 1 70 LYS . A . 70 LYS o 1 1217 1 1 1 1 71 ASP . A . 71 ASP p 1 1217 1 1 1 1 72 TYR . A . 72 TYR p 1 1217 1 1 1 1 73 LEU . A . 73 LEU a 1 1217 1 1 1 1 74 LYS . A . 74 LYS e 1 1217 1 1 1 1 75 PRO . A . 75 PRO h 1 1217 1 1 1 1 76 ASP . A . 76 ASP i 1 1217 1 1 1 1 77 ASP . A . 77 ASP a 1 1217 1 1 1 1 78 SER . A . 78 SER k 1 1217 1 1 1 1 79 ARG . A . 79 ARG l 1 1217 1 1 1 1 80 VAL . A . 80 VAL m 1 1217 1 1 1 1 81 ILE . A . 81 ILE b 1 1217 1 1 1 1 82 ALA . A . 82 ALA d 1 1217 1 1 1 1 83 HIS . A . 83 HIS c 1 1217 1 1 1 1 84 THR . A . 84 THR d 1 1217 1 1 1 1 85 LYS . A . 85 LYS d 1 1217 1 1 1 1 86 LEU . A . 86 LEU d 1 1217 1 1 1 1 87 ILE . A . 87 ILE d 1 1217 1 1 1 1 88 GLY . A . 88 GLY e 1 1217 1 1 1 1 89 SER . A . 89 SER h 1 1217 1 1 1 1 90 GLY . A . 90 GLY i 1 1217 1 1 1 1 91 GLU . A . 91 GLU a 1 1217 1 1 1 1 92 LYS . A . 92 LYS c 1 1217 1 1 1 1 93 ASP . A . 93 ASP d 1 1217 1 1 1 1 94 SER . A . 94 SER d 1 1217 1 1 1 1 95 VAL . A . 95 VAL d 1 1217 1 1 1 1 96 THR . A . 96 THR d 1 1217 1 1 1 1 97 PHE . A . 97 PHE d 1 1217 1 1 1 1 98 ASP . A . 98 ASP f 1 1217 1 1 1 1 99 VAL . A . 99 VAL k 1 1217 1 1 1 1 100 SER . A . 100 SER l 1 1217 1 1 1 1 101 LYS . A . 101 LYS p 1 1217 1 1 1 1 102 LEU . A . 102 LEU c 1 1217 1 1 1 1 103 LYS . A . 103 LYS e 1 1217 1 1 1 1 104 GLU . A . 104 GLU h 1 1217 1 1 1 1 105 GLY . A . 105 GLY i 1 1217 1 1 1 1 106 GLU . A . 106 GLU a 1 1217 1 1 1 1 107 GLN . A . 107 GLN c 1 1217 1 1 1 1 108 TYR . A . 108 TYR d 1 1217 1 1 1 1 109 MET . A . 109 MET d 1 1217 1 1 1 1 110 PHE . A . 110 PHE d 1 1217 1 1 1 1 111 PHE . A . 111 PHE d 1 1217 1 1 1 1 112 CYS . A . 112 CYS f 1 1217 1 1 1 1 113 THR . A . 113 THR b 1 1217 1 1 1 1 114 PHE . A . 114 PHE e 1 1217 1 1 1 1 115 PRO . A . 115 PRO h 1 1217 1 1 1 1 116 GLY . A . 116 GLY k 1 1217 1 1 1 1 117 HIS . A . 117 HIS l 1 1217 1 1 1 1 118 SER . A . 118 SER m 1 1217 1 1 1 1 119 ALA . A . 119 ALA m 1 1217 1 1 1 1 120 LEU . A . 120 LEU m 1 1217 1 1 1 1 121 MET . A . 121 MET g 1 1217 1 1 1 1 122 LYS . A . 122 LYS c 1 1217 1 1 1 1 123 GLY . A . 123 GLY d 1 1217 1 1 1 1 124 THR . A . 124 THR d 1 1217 1 1 1 1 125 LEU . A . 125 LEU d 1 1217 1 1 1 1 126 THR . A . 126 THR d 1 1217 1 1 1 1 127 LEU . A . 127 LEU . 1 1217 1 1 1 1 128 LYS . A . 128 LYS . 1 1217 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1bex_5731#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1bex.ent _PB_list.Output_file_name bmr1217_1bex_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr1217_1bex_PB.str _PB_list.AA_seq_one_letter_code AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK _PB_list.PB_seq_code zzbdcddddfkopafbfbdcddfklmbdcdddddedjbdfklmpccdddddfklmmmmmmmmmmnojkloppaehiaklmbdcddddehiacdddddfklpcehiacddddfbehklmmmgcddddzz _PB_list.PDB_ID 1BEX _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.289 _PB_list.PDBX_refine_ls_R_factor_R_work 0.209 _PB_list.PDBX_refine_ls_d_res_high 2.3 _PB_list.PDBX_refine_ls_d_res_low 20.0 _PB_list.Entry_ID 1217 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . B . 1 ALA . 1 1217 2 1 1 1 2 GLU . B . 2 GLU . 1 1217 2 1 1 1 3 CYS . B . 3 CYS b 1 1217 2 1 1 1 4 SER . B . 4 SER d 1 1217 2 1 1 1 5 VAL . B . 5 VAL c 1 1217 2 1 1 1 6 ASP . B . 6 ASP d 1 1217 2 1 1 1 7 ILE . B . 7 ILE d 1 1217 2 1 1 1 8 GLN . B . 8 GLN d 1 1217 2 1 1 1 9 GLY . B . 9 GLY d 1 1217 2 1 1 1 10 ASN . B . 10 ASN f 1 1217 2 1 1 1 11 ASP . B . 11 ASP k 1 1217 2 1 1 1 12 GLN . B . 12 GLN o 1 1217 2 1 1 1 13 MET . B . 13 MET p 1 1217 2 1 1 1 14 GLN . B . 14 GLN a 1 1217 2 1 1 1 15 PHE . B . 15 PHE f 1 1217 2 1 1 1 16 ASN . B . 16 ASN b 1 1217 2 1 1 1 17 THR . B . 17 THR f 1 1217 2 1 1 1 18 ASN . B . 18 ASN b 1 1217 2 1 1 1 19 ALA . B . 19 ALA d 1 1217 2 1 1 1 20 ILE . B . 20 ILE c 1 1217 2 1 1 1 21 THR . B . 21 THR d 1 1217 2 1 1 1 22 VAL . B . 22 VAL d 1 1217 2 1 1 1 23 ASP . B . 23 ASP f 1 1217 2 1 1 1 24 LYS . B . 24 LYS k 1 1217 2 1 1 1 25 SER . B . 25 SER l 1 1217 2 1 1 1 26 CYS . B . 26 CYS m 1 1217 2 1 1 1 27 LYS . B . 27 LYS b 1 1217 2 1 1 1 28 GLN . B . 28 GLN d 1 1217 2 1 1 1 29 PHE . B . 29 PHE c 1 1217 2 1 1 1 30 THR . B . 30 THR d 1 1217 2 1 1 1 31 VAL . B . 31 VAL d 1 1217 2 1 1 1 32 ASN . B . 32 ASN d 1 1217 2 1 1 1 33 LEU . B . 33 LEU d 1 1217 2 1 1 1 34 SER . B . 34 SER d 1 1217 2 1 1 1 35 HIS . B . 35 HIS e 1 1217 2 1 1 1 36 PRO . B . 36 PRO d 1 1217 2 1 1 1 37 GLY . B . 37 GLY j 1 1217 2 1 1 1 38 ASN . B . 38 ASN b 1 1217 2 1 1 1 39 LEU . B . 39 LEU d 1 1217 2 1 1 1 40 PRO . B . 40 PRO f 1 1217 2 1 1 1 41 LYS . B . 41 LYS k 1 1217 2 1 1 1 42 ASN . B . 42 ASN l 1 1217 2 1 1 1 43 VAL . B . 43 VAL m 1 1217 2 1 1 1 44 MET . B . 44 MET p 1 1217 2 1 1 1 45 GLY . B . 45 GLY c 1 1217 2 1 1 1 46 HIS . B . 46 HIS c 1 1217 2 1 1 1 47 ASN . B . 47 ASN d 1 1217 2 1 1 1 48 TRP . B . 48 TRP d 1 1217 2 1 1 1 49 VAL . B . 49 VAL d 1 1217 2 1 1 1 50 LEU . B . 50 LEU d 1 1217 2 1 1 1 51 SER . B . 51 SER d 1 1217 2 1 1 1 52 THR . B . 52 THR f 1 1217 2 1 1 1 53 ALA . B . 53 ALA k 1 1217 2 1 1 1 54 ALA . B . 54 ALA l 1 1217 2 1 1 1 55 ASP . B . 55 ASP m 1 1217 2 1 1 1 56 MET . B . 56 MET m 1 1217 2 1 1 1 57 GLN . B . 57 GLN m 1 1217 2 1 1 1 58 GLY . B . 58 GLY m 1 1217 2 1 1 1 59 VAL . B . 59 VAL m 1 1217 2 1 1 1 60 VAL . B . 60 VAL m 1 1217 2 1 1 1 61 THR . B . 61 THR m 1 1217 2 1 1 1 62 ASP . B . 62 ASP m 1 1217 2 1 1 1 63 GLY . B . 63 GLY m 1 1217 2 1 1 1 64 MET . B . 64 MET m 1 1217 2 1 1 1 65 ALA . B . 65 ALA n 1 1217 2 1 1 1 66 SER . B . 66 SER o 1 1217 2 1 1 1 67 GLY . B . 67 GLY j 1 1217 2 1 1 1 68 LEU . B . 68 LEU k 1 1217 2 1 1 1 69 ASP . B . 69 ASP l 1 1217 2 1 1 1 70 LYS . B . 70 LYS o 1 1217 2 1 1 1 71 ASP . B . 71 ASP p 1 1217 2 1 1 1 72 TYR . B . 72 TYR p 1 1217 2 1 1 1 73 LEU . B . 73 LEU a 1 1217 2 1 1 1 74 LYS . B . 74 LYS e 1 1217 2 1 1 1 75 PRO . B . 75 PRO h 1 1217 2 1 1 1 76 ASP . B . 76 ASP i 1 1217 2 1 1 1 77 ASP . B . 77 ASP a 1 1217 2 1 1 1 78 SER . B . 78 SER k 1 1217 2 1 1 1 79 ARG . B . 79 ARG l 1 1217 2 1 1 1 80 VAL . B . 80 VAL m 1 1217 2 1 1 1 81 ILE . B . 81 ILE b 1 1217 2 1 1 1 82 ALA . B . 82 ALA d 1 1217 2 1 1 1 83 HIS . B . 83 HIS c 1 1217 2 1 1 1 84 THR . B . 84 THR d 1 1217 2 1 1 1 85 LYS . B . 85 LYS d 1 1217 2 1 1 1 86 LEU . B . 86 LEU d 1 1217 2 1 1 1 87 ILE . B . 87 ILE d 1 1217 2 1 1 1 88 GLY . B . 88 GLY e 1 1217 2 1 1 1 89 SER . B . 89 SER h 1 1217 2 1 1 1 90 GLY . B . 90 GLY i 1 1217 2 1 1 1 91 GLU . B . 91 GLU a 1 1217 2 1 1 1 92 LYS . B . 92 LYS c 1 1217 2 1 1 1 93 ASP . B . 93 ASP d 1 1217 2 1 1 1 94 SER . B . 94 SER d 1 1217 2 1 1 1 95 VAL . B . 95 VAL d 1 1217 2 1 1 1 96 THR . B . 96 THR d 1 1217 2 1 1 1 97 PHE . B . 97 PHE d 1 1217 2 1 1 1 98 ASP . B . 98 ASP f 1 1217 2 1 1 1 99 VAL . B . 99 VAL k 1 1217 2 1 1 1 100 SER . B . 100 SER l 1 1217 2 1 1 1 101 LYS . B . 101 LYS p 1 1217 2 1 1 1 102 LEU . B . 102 LEU c 1 1217 2 1 1 1 103 LYS . B . 103 LYS e 1 1217 2 1 1 1 104 GLU . B . 104 GLU h 1 1217 2 1 1 1 105 GLY . B . 105 GLY i 1 1217 2 1 1 1 106 GLU . B . 106 GLU a 1 1217 2 1 1 1 107 GLN . B . 107 GLN c 1 1217 2 1 1 1 108 TYR . B . 108 TYR d 1 1217 2 1 1 1 109 MET . B . 109 MET d 1 1217 2 1 1 1 110 PHE . B . 110 PHE d 1 1217 2 1 1 1 111 PHE . B . 111 PHE d 1 1217 2 1 1 1 112 CYS . B . 112 CYS f 1 1217 2 1 1 1 113 THR . B . 113 THR b 1 1217 2 1 1 1 114 PHE . B . 114 PHE e 1 1217 2 1 1 1 115 PRO . B . 115 PRO h 1 1217 2 1 1 1 116 GLY . B . 116 GLY k 1 1217 2 1 1 1 117 HIS . B . 117 HIS l 1 1217 2 1 1 1 118 SER . B . 118 SER m 1 1217 2 1 1 1 119 ALA . B . 119 ALA m 1 1217 2 1 1 1 120 LEU . B . 120 LEU m 1 1217 2 1 1 1 121 MET . B . 121 MET g 1 1217 2 1 1 1 122 LYS . B . 122 LYS c 1 1217 2 1 1 1 123 GLY . B . 123 GLY d 1 1217 2 1 1 1 124 THR . B . 124 THR d 1 1217 2 1 1 1 125 LEU . B . 125 LEU d 1 1217 2 1 1 1 126 THR . B . 126 THR d 1 1217 2 1 1 1 127 LEU . B . 127 LEU . 1 1217 2 1 1 1 128 LYS . B . 128 LYS . 1 1217 2 stop_ save_