data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1ndm_6433#C _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1ndm.ent _PB_list.Output_file_name bmr1093_1ndm_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr1093_1ndm_PB.str _PB_list.AA_seq_one_letter_code KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL _PB_list.PB_seq_code zzdfklmmmmmmmnopgopghiafklmmmmmmmmnoopakbccddfblcdcedjkopafklmpcehiaghiaklnopafklmmcfblklmmmmmmmmmmpmnlmmlpmmlmmmmgopafklmmgoiazz _PB_list.PDB_ID 1NDM _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.258 _PB_list.PDBX_refine_ls_R_factor_R_work 0.208 _PB_list.PDBX_refine_ls_d_res_high 2.10 _PB_list.PDBX_refine_ls_d_res_low 8.45 _PB_list.Entry_ID 1093 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 LYS . C . 1 LYS . 1 1093 1 1 1 1 2 VAL . C . 2 VAL . 1 1093 1 1 1 1 3 PHE . C . 3 PHE d 1 1093 1 1 1 1 4 GLY . C . 4 GLY f 1 1093 1 1 1 1 5 ARG . C . 5 ARG k 1 1093 1 1 1 1 6 CYS . C . 6 CYS l 1 1093 1 1 1 1 7 GLU . C . 7 GLU m 1 1093 1 1 1 1 8 LEU . C . 8 LEU m 1 1093 1 1 1 1 9 ALA . C . 9 ALA m 1 1093 1 1 1 1 10 ALA . C . 10 ALA m 1 1093 1 1 1 1 11 ALA . C . 11 ALA m 1 1093 1 1 1 1 12 MET . C . 12 MET m 1 1093 1 1 1 1 13 LYS . C . 13 LYS m 1 1093 1 1 1 1 14 ARG . C . 14 ARG n 1 1093 1 1 1 1 15 HIS . C . 15 HIS o 1 1093 1 1 1 1 16 GLY . C . 16 GLY p 1 1093 1 1 1 1 17 LEU . C . 17 LEU g 1 1093 1 1 1 1 18 ASP . C . 18 ASP o 1 1093 1 1 1 1 19 ASN . C . 19 ASN p 1 1093 1 1 1 1 20 TYR . C . 20 TYR g 1 1093 1 1 1 1 21 ARG . C . 21 ARG h 1 1093 1 1 1 1 22 GLY . C . 22 GLY i 1 1093 1 1 1 1 23 TYR . C . 23 TYR a 1 1093 1 1 1 1 24 SER . C . 24 SER f 1 1093 1 1 1 1 25 LEU . C . 25 LEU k 1 1093 1 1 1 1 26 GLY . C . 26 GLY l 1 1093 1 1 1 1 27 ASN . C . 27 ASN m 1 1093 1 1 1 1 28 TRP . C . 28 TRP m 1 1093 1 1 1 1 29 VAL . C . 29 VAL m 1 1093 1 1 1 1 30 CYS . C . 30 CYS m 1 1093 1 1 1 1 31 ALA . C . 31 ALA m 1 1093 1 1 1 1 32 ALA . C . 32 ALA m 1 1093 1 1 1 1 33 LYS . C . 33 LYS m 1 1093 1 1 1 1 34 PHE . C . 34 PHE m 1 1093 1 1 1 1 35 GLU . C . 35 GLU n 1 1093 1 1 1 1 36 SER . C . 36 SER o 1 1093 1 1 1 1 37 ASN . C . 37 ASN o 1 1093 1 1 1 1 38 PHE . C . 38 PHE p 1 1093 1 1 1 1 39 ASN . C . 39 ASN a 1 1093 1 1 1 1 40 THR . C . 40 THR k 1 1093 1 1 1 1 41 GLN . C . 41 GLN b 1 1093 1 1 1 1 42 ALA . C . 42 ALA c 1 1093 1 1 1 1 43 THR . C . 43 THR c 1 1093 1 1 1 1 44 ASN . C . 44 ASN d 1 1093 1 1 1 1 45 ARG . C . 45 ARG d 1 1093 1 1 1 1 46 ASN . C . 46 ASN f 1 1093 1 1 1 1 47 THR . C . 47 THR b 1 1093 1 1 1 1 48 ASP . C . 48 ASP l 1 1093 1 1 1 1 49 GLY . C . 49 GLY c 1 1093 1 1 1 1 50 SER . C . 50 SER d 1 1093 1 1 1 1 51 THR . C . 51 THR c 1 1093 1 1 1 1 52 ASP . C . 52 ASP e 1 1093 1 1 1 1 53 TYR . C . 53 TYR d 1 1093 1 1 1 1 54 GLY . C . 54 GLY j 1 1093 1 1 1 1 55 ILE . C . 55 ILE k 1 1093 1 1 1 1 56 LEU . C . 56 LEU o 1 1093 1 1 1 1 57 GLN . C . 57 GLN p 1 1093 1 1 1 1 58 ILE . C . 58 ILE a 1 1093 1 1 1 1 59 ASN . C . 59 ASN f 1 1093 1 1 1 1 60 SER . C . 60 SER k 1 1093 1 1 1 1 61 ARG . C . 61 ARG l 1 1093 1 1 1 1 62 TRP . C . 62 TRP m 1 1093 1 1 1 1 63 TRP . C . 63 TRP p 1 1093 1 1 1 1 64 CYS . C . 64 CYS c 1 1093 1 1 1 1 65 ASN . C . 65 ASN e 1 1093 1 1 1 1 66 ASP . C . 66 ASP h 1 1093 1 1 1 1 67 GLY . C . 67 GLY i 1 1093 1 1 1 1 68 ARG . C . 68 ARG a 1 1093 1 1 1 1 69 THR . C . 69 THR g 1 1093 1 1 1 1 70 PRO . C . 70 PRO h 1 1093 1 1 1 1 71 GLY . C . 71 GLY i 1 1093 1 1 1 1 72 SER . C . 72 SER a 1 1093 1 1 1 1 73 ARG . C . 73 ARG k 1 1093 1 1 1 1 74 ASN . C . 74 ASN l 1 1093 1 1 1 1 75 LEU . C . 75 LEU n 1 1093 1 1 1 1 76 CYS . C . 76 CYS o 1 1093 1 1 1 1 77 ASN . C . 77 ASN p 1 1093 1 1 1 1 78 ILE . C . 78 ILE a 1 1093 1 1 1 1 79 PRO . C . 79 PRO f 1 1093 1 1 1 1 80 CYS . C . 80 CYS k 1 1093 1 1 1 1 81 SER . C . 81 SER l 1 1093 1 1 1 1 82 ALA . C . 82 ALA m 1 1093 1 1 1 1 83 LEU . C . 83 LEU m 1 1093 1 1 1 1 84 LEU . C . 84 LEU c 1 1093 1 1 1 1 85 SER . C . 85 SER f 1 1093 1 1 1 1 86 SER . C . 86 SER b 1 1093 1 1 1 1 87 ASP . C . 87 ASP l 1 1093 1 1 1 1 88 ILE . C . 88 ILE k 1 1093 1 1 1 1 89 THR . C . 89 THR l 1 1093 1 1 1 1 90 ALA . C . 90 ALA m 1 1093 1 1 1 1 91 SER . C . 91 SER m 1 1093 1 1 1 1 92 VAL . C . 92 VAL m 1 1093 1 1 1 1 93 ASN . C . 93 ASN m 1 1093 1 1 1 1 94 CYS . C . 94 CYS m 1 1093 1 1 1 1 95 ALA . C . 95 ALA m 1 1093 1 1 1 1 96 LYS . C . 96 LYS m 1 1093 1 1 1 1 97 LYS . C . 97 LYS m 1 1093 1 1 1 1 98 ILE . C . 98 ILE m 1 1093 1 1 1 1 99 VAL . C . 99 VAL m 1 1093 1 1 1 1 100 SER . C . 100 SER p 1 1093 1 1 1 1 101 ASP . C . 101 ASP m 1 1093 1 1 1 1 102 GLY . C . 102 GLY n 1 1093 1 1 1 1 103 ASN . C . 103 ASN l 1 1093 1 1 1 1 104 GLY . C . 104 GLY m 1 1093 1 1 1 1 105 MET . C . 105 MET m 1 1093 1 1 1 1 106 ASN . C . 106 ASN l 1 1093 1 1 1 1 107 ALA . C . 107 ALA p 1 1093 1 1 1 1 108 TRP . C . 108 TRP m 1 1093 1 1 1 1 109 VAL . C . 109 VAL m 1 1093 1 1 1 1 110 ALA . C . 110 ALA l 1 1093 1 1 1 1 111 TRP . C . 111 TRP m 1 1093 1 1 1 1 112 ARG . C . 112 ARG m 1 1093 1 1 1 1 113 ASN . C . 113 ASN m 1 1093 1 1 1 1 114 ARG . C . 114 ARG m 1 1093 1 1 1 1 115 CYS . C . 115 CYS g 1 1093 1 1 1 1 116 LYS . C . 116 LYS o 1 1093 1 1 1 1 117 GLY . C . 117 GLY p 1 1093 1 1 1 1 118 THR . C . 118 THR a 1 1093 1 1 1 1 119 ASP . C . 119 ASP f 1 1093 1 1 1 1 120 VAL . C . 120 VAL k 1 1093 1 1 1 1 121 GLN . C . 121 GLN l 1 1093 1 1 1 1 122 ALA . C . 122 ALA m 1 1093 1 1 1 1 123 TRP . C . 123 TRP m 1 1093 1 1 1 1 124 ILE . C . 124 ILE g 1 1093 1 1 1 1 125 ARG . C . 125 ARG o 1 1093 1 1 1 1 126 GLY . C . 126 GLY i 1 1093 1 1 1 1 127 CYS . C . 127 CYS a 1 1093 1 1 1 1 128 ARG . C . 128 ARG . 1 1093 1 1 1 1 129 LEU . C . 129 LEU . 1 1093 1 stop_ save_