data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1q6a_1051#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1q6a.ent _PB_list.Output_file_name bmr5824_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5824_PB.str _PB_list.AA_seq_one_letter_code AMARMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELMDTFSKQLKLEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPREV _PB_list.PB_seq_code zzpgbjmlmmmmmmmmmmmmmmmmmmmmmmklcfklmmmmmmmmmmmnopafklmmmmmmmmmmmmmmmmmmnopafklmmmmmmmmmmmmmmmmmmmmmmmgcjzz _PB_list.PDB_ID 1Q6A _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "Distance geometry, Simulated Annealing, Radius-of-gyration, Carbon chemical shift and conformational database potential refinement" _PB_list.Entry_ID 5824 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . A . 1 ALA . 1 5824 1 1 1 1 2 MET . A . 2 MET . 1 5824 1 1 1 1 3 ALA . A . 3 ALA p 1 5824 1 1 1 1 4 ARG . A . 4 ARG g 1 5824 1 1 1 1 5 MET . A . 5 MET b 1 5824 1 1 1 1 6 SER . A . 6 SER j 1 5824 1 1 1 1 7 PRO . A . 7 PRO m 1 5824 1 1 1 1 8 ALA . A . 8 ALA l 1 5824 1 1 1 1 9 ASP . A . 9 ASP m 1 5824 1 1 1 1 10 LYS . A . 10 LYS m 1 5824 1 1 1 1 11 ARG . A . 11 ARG m 1 5824 1 1 1 1 12 LYS . A . 12 LYS m 1 5824 1 1 1 1 13 LEU . A . 13 LEU m 1 5824 1 1 1 1 14 LEU . A . 14 LEU m 1 5824 1 1 1 1 15 ASP . A . 15 ASP m 1 5824 1 1 1 1 16 GLU . A . 16 GLU m 1 5824 1 1 1 1 17 LEU . A . 17 LEU m 1 5824 1 1 1 1 18 ARG . A . 18 ARG m 1 5824 1 1 1 1 19 SER . A . 19 SER m 1 5824 1 1 1 1 20 ILE . A . 20 ILE m 1 5824 1 1 1 1 21 TYR . A . 21 TYR m 1 5824 1 1 1 1 22 ARG . A . 22 ARG m 1 5824 1 1 1 1 23 THR . A . 23 THR m 1 5824 1 1 1 1 24 ILE . A . 24 ILE m 1 5824 1 1 1 1 25 VAL . A . 25 VAL m 1 5824 1 1 1 1 26 LEU . A . 26 LEU m 1 5824 1 1 1 1 27 GLU . A . 27 GLU m 1 5824 1 1 1 1 28 TYR . A . 28 TYR m 1 5824 1 1 1 1 29 PHE . A . 29 PHE m 1 5824 1 1 1 1 30 ASN . A . 30 ASN m 1 5824 1 1 1 1 31 THR . A . 31 THR k 1 5824 1 1 1 1 32 ASP . A . 32 ASP l 1 5824 1 1 1 1 33 ALA . A . 33 ALA c 1 5824 1 1 1 1 34 LYS . A . 34 LYS f 1 5824 1 1 1 1 35 VAL . A . 35 VAL k 1 5824 1 1 1 1 36 ASN . A . 36 ASN l 1 5824 1 1 1 1 37 GLU . A . 37 GLU m 1 5824 1 1 1 1 38 ARG . A . 38 ARG m 1 5824 1 1 1 1 39 ILE . A . 39 ILE m 1 5824 1 1 1 1 40 ASP . A . 40 ASP m 1 5824 1 1 1 1 41 GLU . A . 41 GLU m 1 5824 1 1 1 1 42 PHE . A . 42 PHE m 1 5824 1 1 1 1 43 VAL . A . 43 VAL m 1 5824 1 1 1 1 44 SER . A . 44 SER m 1 5824 1 1 1 1 45 LYS . A . 45 LYS m 1 5824 1 1 1 1 46 ALA . A . 46 ALA m 1 5824 1 1 1 1 47 PHE . A . 47 PHE m 1 5824 1 1 1 1 48 PHE . A . 48 PHE n 1 5824 1 1 1 1 49 ALA . A . 49 ALA o 1 5824 1 1 1 1 50 ASP . A . 50 ASP p 1 5824 1 1 1 1 51 ILE . A . 51 ILE a 1 5824 1 1 1 1 52 SER . A . 52 SER f 1 5824 1 1 1 1 53 VAL . A . 53 VAL k 1 5824 1 1 1 1 54 SER . A . 54 SER l 1 5824 1 1 1 1 55 GLN . A . 55 GLN m 1 5824 1 1 1 1 56 VAL . A . 56 VAL m 1 5824 1 1 1 1 57 LEU . A . 57 LEU m 1 5824 1 1 1 1 58 GLU . A . 58 GLU m 1 5824 1 1 1 1 59 ILE . A . 59 ILE m 1 5824 1 1 1 1 60 HIS . A . 60 HIS m 1 5824 1 1 1 1 61 VAL . A . 61 VAL m 1 5824 1 1 1 1 62 GLU . A . 62 GLU m 1 5824 1 1 1 1 63 LEU . A . 63 LEU m 1 5824 1 1 1 1 64 MET . A . 64 MET m 1 5824 1 1 1 1 65 ASP . A . 65 ASP m 1 5824 1 1 1 1 66 THR . A . 66 THR m 1 5824 1 1 1 1 67 PHE . A . 67 PHE m 1 5824 1 1 1 1 68 SER . A . 68 SER m 1 5824 1 1 1 1 69 LYS . A . 69 LYS m 1 5824 1 1 1 1 70 GLN . A . 70 GLN m 1 5824 1 1 1 1 71 LEU . A . 71 LEU m 1 5824 1 1 1 1 72 LYS . A . 72 LYS m 1 5824 1 1 1 1 73 LEU . A . 73 LEU n 1 5824 1 1 1 1 74 GLU . A . 74 GLU o 1 5824 1 1 1 1 75 GLY . A . 75 GLY p 1 5824 1 1 1 1 76 ARG . A . 76 ARG a 1 5824 1 1 1 1 77 SER . A . 77 SER f 1 5824 1 1 1 1 78 GLU . A . 78 GLU k 1 5824 1 1 1 1 79 ASP . A . 79 ASP l 1 5824 1 1 1 1 80 ILE . A . 80 ILE m 1 5824 1 1 1 1 81 LEU . A . 81 LEU m 1 5824 1 1 1 1 82 LEU . A . 82 LEU m 1 5824 1 1 1 1 83 ASP . A . 83 ASP m 1 5824 1 1 1 1 84 TYR . A . 84 TYR m 1 5824 1 1 1 1 85 ARG . A . 85 ARG m 1 5824 1 1 1 1 86 LEU . A . 86 LEU m 1 5824 1 1 1 1 87 THR . A . 87 THR m 1 5824 1 1 1 1 88 LEU . A . 88 LEU m 1 5824 1 1 1 1 89 ILE . A . 89 ILE m 1 5824 1 1 1 1 90 ASP . A . 90 ASP m 1 5824 1 1 1 1 91 VAL . A . 91 VAL m 1 5824 1 1 1 1 92 ILE . A . 92 ILE m 1 5824 1 1 1 1 93 ALA . A . 93 ALA m 1 5824 1 1 1 1 94 HIS . A . 94 HIS m 1 5824 1 1 1 1 95 LEU . A . 95 LEU m 1 5824 1 1 1 1 96 CYS . A . 96 CYS m 1 5824 1 1 1 1 97 GLU . A . 97 GLU m 1 5824 1 1 1 1 98 MET . A . 98 MET m 1 5824 1 1 1 1 99 TYR . A . 99 TYR m 1 5824 1 1 1 1 100 ARG . A . 100 ARG m 1 5824 1 1 1 1 101 ARG . A . 101 ARG m 1 5824 1 1 1 1 102 SER . A . 102 SER m 1 5824 1 1 1 1 103 ILE . A . 103 ILE g 1 5824 1 1 1 1 104 PRO . A . 104 PRO c 1 5824 1 1 1 1 105 ARG . A . 105 ARG j 1 5824 1 1 1 1 106 GLU . A . 106 GLU . 1 5824 1 1 1 1 107 VAL . A . 107 VAL . 1 5824 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1q6a_1051#B _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1q6a.ent _PB_list.Output_file_name bmr5824_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5824_PB.str _PB_list.AA_seq_one_letter_code AMARMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELMDTFSKQLKLEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPREV _PB_list.PB_seq_code zzpgbjmlmmmmmmmmmmmmmmmmmmmmmmklcfklmmmmmmmmmmmnopafklmmmmmmmmmmmmmmmmmmnopafklmmmmmmmmmmmmmmmmmmmmmmmgcjzz _PB_list.PDB_ID 1Q6A _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "Distance geometry, Simulated Annealing, Radius-of-gyration, Carbon chemical shift and conformational database potential refinement" _PB_list.Entry_ID 5824 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . B . 1 ALA . 1 5824 2 1 1 1 2 MET . B . 2 MET . 1 5824 2 1 1 1 3 ALA . B . 3 ALA p 1 5824 2 1 1 1 4 ARG . B . 4 ARG g 1 5824 2 1 1 1 5 MET . B . 5 MET b 1 5824 2 1 1 1 6 SER . B . 6 SER j 1 5824 2 1 1 1 7 PRO . B . 7 PRO m 1 5824 2 1 1 1 8 ALA . B . 8 ALA l 1 5824 2 1 1 1 9 ASP . B . 9 ASP m 1 5824 2 1 1 1 10 LYS . B . 10 LYS m 1 5824 2 1 1 1 11 ARG . B . 11 ARG m 1 5824 2 1 1 1 12 LYS . B . 12 LYS m 1 5824 2 1 1 1 13 LEU . B . 13 LEU m 1 5824 2 1 1 1 14 LEU . B . 14 LEU m 1 5824 2 1 1 1 15 ASP . B . 15 ASP m 1 5824 2 1 1 1 16 GLU . B . 16 GLU m 1 5824 2 1 1 1 17 LEU . B . 17 LEU m 1 5824 2 1 1 1 18 ARG . B . 18 ARG m 1 5824 2 1 1 1 19 SER . B . 19 SER m 1 5824 2 1 1 1 20 ILE . B . 20 ILE m 1 5824 2 1 1 1 21 TYR . B . 21 TYR m 1 5824 2 1 1 1 22 ARG . B . 22 ARG m 1 5824 2 1 1 1 23 THR . B . 23 THR m 1 5824 2 1 1 1 24 ILE . B . 24 ILE m 1 5824 2 1 1 1 25 VAL . B . 25 VAL m 1 5824 2 1 1 1 26 LEU . B . 26 LEU m 1 5824 2 1 1 1 27 GLU . B . 27 GLU m 1 5824 2 1 1 1 28 TYR . B . 28 TYR m 1 5824 2 1 1 1 29 PHE . B . 29 PHE m 1 5824 2 1 1 1 30 ASN . B . 30 ASN m 1 5824 2 1 1 1 31 THR . B . 31 THR k 1 5824 2 1 1 1 32 ASP . B . 32 ASP l 1 5824 2 1 1 1 33 ALA . B . 33 ALA c 1 5824 2 1 1 1 34 LYS . B . 34 LYS f 1 5824 2 1 1 1 35 VAL . B . 35 VAL k 1 5824 2 1 1 1 36 ASN . B . 36 ASN l 1 5824 2 1 1 1 37 GLU . B . 37 GLU m 1 5824 2 1 1 1 38 ARG . B . 38 ARG m 1 5824 2 1 1 1 39 ILE . B . 39 ILE m 1 5824 2 1 1 1 40 ASP . B . 40 ASP m 1 5824 2 1 1 1 41 GLU . B . 41 GLU m 1 5824 2 1 1 1 42 PHE . B . 42 PHE m 1 5824 2 1 1 1 43 VAL . B . 43 VAL m 1 5824 2 1 1 1 44 SER . B . 44 SER m 1 5824 2 1 1 1 45 LYS . B . 45 LYS m 1 5824 2 1 1 1 46 ALA . B . 46 ALA m 1 5824 2 1 1 1 47 PHE . B . 47 PHE m 1 5824 2 1 1 1 48 PHE . B . 48 PHE n 1 5824 2 1 1 1 49 ALA . B . 49 ALA o 1 5824 2 1 1 1 50 ASP . B . 50 ASP p 1 5824 2 1 1 1 51 ILE . B . 51 ILE a 1 5824 2 1 1 1 52 SER . B . 52 SER f 1 5824 2 1 1 1 53 VAL . B . 53 VAL k 1 5824 2 1 1 1 54 SER . B . 54 SER l 1 5824 2 1 1 1 55 GLN . B . 55 GLN m 1 5824 2 1 1 1 56 VAL . B . 56 VAL m 1 5824 2 1 1 1 57 LEU . B . 57 LEU m 1 5824 2 1 1 1 58 GLU . B . 58 GLU m 1 5824 2 1 1 1 59 ILE . B . 59 ILE m 1 5824 2 1 1 1 60 HIS . B . 60 HIS m 1 5824 2 1 1 1 61 VAL . B . 61 VAL m 1 5824 2 1 1 1 62 GLU . B . 62 GLU m 1 5824 2 1 1 1 63 LEU . B . 63 LEU m 1 5824 2 1 1 1 64 MET . B . 64 MET m 1 5824 2 1 1 1 65 ASP . B . 65 ASP m 1 5824 2 1 1 1 66 THR . B . 66 THR m 1 5824 2 1 1 1 67 PHE . B . 67 PHE m 1 5824 2 1 1 1 68 SER . B . 68 SER m 1 5824 2 1 1 1 69 LYS . B . 69 LYS m 1 5824 2 1 1 1 70 GLN . B . 70 GLN m 1 5824 2 1 1 1 71 LEU . B . 71 LEU m 1 5824 2 1 1 1 72 LYS . B . 72 LYS m 1 5824 2 1 1 1 73 LEU . B . 73 LEU n 1 5824 2 1 1 1 74 GLU . B . 74 GLU o 1 5824 2 1 1 1 75 GLY . B . 75 GLY p 1 5824 2 1 1 1 76 ARG . B . 76 ARG a 1 5824 2 1 1 1 77 SER . B . 77 SER f 1 5824 2 1 1 1 78 GLU . B . 78 GLU k 1 5824 2 1 1 1 79 ASP . B . 79 ASP l 1 5824 2 1 1 1 80 ILE . B . 80 ILE m 1 5824 2 1 1 1 81 LEU . B . 81 LEU m 1 5824 2 1 1 1 82 LEU . B . 82 LEU m 1 5824 2 1 1 1 83 ASP . B . 83 ASP m 1 5824 2 1 1 1 84 TYR . B . 84 TYR m 1 5824 2 1 1 1 85 ARG . B . 85 ARG m 1 5824 2 1 1 1 86 LEU . B . 86 LEU m 1 5824 2 1 1 1 87 THR . B . 87 THR m 1 5824 2 1 1 1 88 LEU . B . 88 LEU m 1 5824 2 1 1 1 89 ILE . B . 89 ILE m 1 5824 2 1 1 1 90 ASP . B . 90 ASP m 1 5824 2 1 1 1 91 VAL . B . 91 VAL m 1 5824 2 1 1 1 92 ILE . B . 92 ILE m 1 5824 2 1 1 1 93 ALA . B . 93 ALA m 1 5824 2 1 1 1 94 HIS . B . 94 HIS m 1 5824 2 1 1 1 95 LEU . B . 95 LEU m 1 5824 2 1 1 1 96 CYS . B . 96 CYS m 1 5824 2 1 1 1 97 GLU . B . 97 GLU m 1 5824 2 1 1 1 98 MET . B . 98 MET m 1 5824 2 1 1 1 99 TYR . B . 99 TYR m 1 5824 2 1 1 1 100 ARG . B . 100 ARG m 1 5824 2 1 1 1 101 ARG . B . 101 ARG m 1 5824 2 1 1 1 102 SER . B . 102 SER m 1 5824 2 1 1 1 103 ILE . B . 103 ILE g 1 5824 2 1 1 1 104 PRO . B . 104 PRO c 1 5824 2 1 1 1 105 ARG . B . 105 ARG j 1 5824 2 1 1 1 106 GLU . B . 106 GLU . 1 5824 2 1 1 1 107 VAL . B . 107 VAL . 1 5824 2 stop_ save_