data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2nd4_11154#A _PB_list.Queried_date 2016-09-17 _PB_list.Input_file_name pdb2nd4.ent _PB_list.Output_file_name bmr19866_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19866_PB.str _PB_list.AA_seq_one_letter_code GENPSASNQLIQKKYVSWRDAADEANTQVAAHEAEIKEETLRQPGVVAAQQALDKANAIVGHDHEQAVKRAQEDYNTAYNEAYNTVRNRYIQVLQQKYIEAAKAQGNYYDETAVEANRTNEQRIADDIKAQTGKDVTVTKDENGNYVVKDEKGNVVATVDKDGKTVKADAKAG _PB_list.PB_seq_code zzcfkbgoiagehiadfklmmmmmmmmmmmmmmlmmmmmmmgfklmmmmmmmmmmmmpgcjklmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmnopaacfklmmmmbdfklmmmmmmmmmnopacdddddfkopacdddfkopafbdcdfkomaccfbacdzz _PB_list.PDB_ID 2ND4 _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "distance geometry, simulated annealing" _PB_list.Entry_ID 19866 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 SER . A . . . . 0 19866 1 1 1 1 2 GLU . A . . . . 0 19866 1 1 1 1 3 PHE . A . . . . 0 19866 1 1 1 1 4 GLU . A . . . . 0 19866 1 1 1 1 5 LEU . A . . . . 0 19866 1 1 1 1 6 ARG . A . . . . 0 19866 1 1 1 1 7 ARG . A . . . . 0 19866 1 1 1 1 8 GLN . A . . . . 0 19866 1 1 1 1 9 ALA . A . . . . 0 19866 1 1 1 1 10 CYS . A . . . . 0 19866 1 1 1 1 11 GLY . A . . . . 0 19866 1 1 1 1 12 ARG . A . . . . 0 19866 1 1 1 1 13 GLN . A . . . . 0 19866 1 1 1 1 14 GLY . A . 1 GLY . 0 19866 1 1 1 1 15 GLU . A . 2 GLU . 0 19866 1 1 1 1 16 ASN . A . 3 ASN c 1 19866 1 1 1 1 17 PRO . A . 4 PRO f 1 19866 1 1 1 1 18 SER . A . 5 SER k 1 19866 1 1 1 1 19 ALA . A . 6 ALA b 1 19866 1 1 1 1 20 SER . A . 7 SER g 1 19866 1 1 1 1 21 ASN . A . 8 ASN o 1 19866 1 1 1 1 22 GLN . A . 9 GLN i 1 19866 1 1 1 1 23 LEU . A . 10 LEU a 1 19866 1 1 1 1 24 ILE . A . 11 ILE g 1 19866 1 1 1 1 25 GLN . A . 12 GLN e 1 19866 1 1 1 1 26 LYS . A . 13 LYS h 1 19866 1 1 1 1 27 LYS . A . 14 LYS i 1 19866 1 1 1 1 28 TYR . A . 15 TYR a 1 19866 1 1 1 1 29 VAL . A . 16 VAL d 1 19866 1 1 1 1 30 SER . A . 17 SER f 1 19866 1 1 1 1 31 TRP . A . 18 TRP k 1 19866 1 1 1 1 32 ARG . A . 19 ARG l 1 19866 1 1 1 1 33 ASP . A . 20 ASP m 1 19866 1 1 1 1 34 ALA . A . 21 ALA m 1 19866 1 1 1 1 35 ALA . A . 22 ALA m 1 19866 1 1 1 1 36 ASP . A . 23 ASP m 1 19866 1 1 1 1 37 GLU . A . 24 GLU m 1 19866 1 1 1 1 38 ALA . A . 25 ALA m 1 19866 1 1 1 1 39 ASN . A . 26 ASN m 1 19866 1 1 1 1 40 THR . A . 27 THR m 1 19866 1 1 1 1 41 GLN . A . 28 GLN m 1 19866 1 1 1 1 42 VAL . A . 29 VAL m 1 19866 1 1 1 1 43 ALA . A . 30 ALA m 1 19866 1 1 1 1 44 ALA . A . 31 ALA m 1 19866 1 1 1 1 45 HIS . A . 32 HIS m 1 19866 1 1 1 1 46 GLU . A . 33 GLU m 1 19866 1 1 1 1 47 ALA . A . 34 ALA l 1 19866 1 1 1 1 48 GLU . A . 35 GLU m 1 19866 1 1 1 1 49 ILE . A . 36 ILE m 1 19866 1 1 1 1 50 LYS . A . 37 LYS m 1 19866 1 1 1 1 51 GLU . A . 38 GLU m 1 19866 1 1 1 1 52 GLU . A . 39 GLU m 1 19866 1 1 1 1 53 THR . A . 40 THR m 1 19866 1 1 1 1 54 LEU . A . 41 LEU m 1 19866 1 1 1 1 55 ARG . A . 42 ARG g 1 19866 1 1 1 1 56 GLN . A . 43 GLN f 1 19866 1 1 1 1 57 PRO . A . 44 PRO k 1 19866 1 1 1 1 58 GLY . A . 45 GLY l 1 19866 1 1 1 1 59 VAL . A . 46 VAL m 1 19866 1 1 1 1 60 VAL . A . 47 VAL m 1 19866 1 1 1 1 61 ALA . A . 48 ALA m 1 19866 1 1 1 1 62 ALA . A . 49 ALA m 1 19866 1 1 1 1 63 GLN . A . 50 GLN m 1 19866 1 1 1 1 64 GLN . A . 51 GLN m 1 19866 1 1 1 1 65 ALA . A . 52 ALA m 1 19866 1 1 1 1 66 LEU . A . 53 LEU m 1 19866 1 1 1 1 67 ASP . A . 54 ASP m 1 19866 1 1 1 1 68 LYS . A . 55 LYS m 1 19866 1 1 1 1 69 ALA . A . 56 ALA m 1 19866 1 1 1 1 70 ASN . A . 57 ASN m 1 19866 1 1 1 1 71 ALA . A . 58 ALA p 1 19866 1 1 1 1 72 ILE . A . 59 ILE g 1 19866 1 1 1 1 73 VAL . A . 60 VAL c 1 19866 1 1 1 1 74 GLY . A . 61 GLY j 1 19866 1 1 1 1 75 HIS . A . 62 HIS k 1 19866 1 1 1 1 76 ASP . A . 63 ASP l 1 19866 1 1 1 1 77 HIS . A . 64 HIS m 1 19866 1 1 1 1 78 GLU . A . 65 GLU m 1 19866 1 1 1 1 79 GLN . A . 66 GLN m 1 19866 1 1 1 1 80 ALA . A . 67 ALA m 1 19866 1 1 1 1 81 VAL . A . 68 VAL m 1 19866 1 1 1 1 82 LYS . A . 69 LYS m 1 19866 1 1 1 1 83 ARG . A . 70 ARG m 1 19866 1 1 1 1 84 ALA . A . 71 ALA m 1 19866 1 1 1 1 85 GLN . A . 72 GLN m 1 19866 1 1 1 1 86 GLU . A . 73 GLU m 1 19866 1 1 1 1 87 ASP . A . 74 ASP m 1 19866 1 1 1 1 88 TYR . A . 75 TYR m 1 19866 1 1 1 1 89 ASN . A . 76 ASN m 1 19866 1 1 1 1 90 THR . A . 77 THR m 1 19866 1 1 1 1 91 ALA . A . 78 ALA m 1 19866 1 1 1 1 92 TYR . A . 79 TYR m 1 19866 1 1 1 1 93 ASN . A . 80 ASN m 1 19866 1 1 1 1 94 GLU . A . 81 GLU m 1 19866 1 1 1 1 95 ALA . A . 82 ALA m 1 19866 1 1 1 1 96 TYR . A . 83 TYR m 1 19866 1 1 1 1 97 ASN . A . 84 ASN m 1 19866 1 1 1 1 98 THR . A . 85 THR m 1 19866 1 1 1 1 99 VAL . A . 86 VAL m 1 19866 1 1 1 1 100 ARG . A . 87 ARG m 1 19866 1 1 1 1 101 ASN . A . 88 ASN m 1 19866 1 1 1 1 102 ARG . A . 89 ARG m 1 19866 1 1 1 1 103 TYR . A . 90 TYR m 1 19866 1 1 1 1 104 ILE . A . 91 ILE m 1 19866 1 1 1 1 105 GLN . A . 92 GLN m 1 19866 1 1 1 1 106 VAL . A . 93 VAL m 1 19866 1 1 1 1 107 LEU . A . 94 LEU m 1 19866 1 1 1 1 108 GLN . A . 95 GLN m 1 19866 1 1 1 1 109 GLN . A . 96 GLN m 1 19866 1 1 1 1 110 LYS . A . 97 LYS m 1 19866 1 1 1 1 111 TYR . A . 98 TYR m 1 19866 1 1 1 1 112 ILE . A . 99 ILE m 1 19866 1 1 1 1 113 GLU . A . 100 GLU m 1 19866 1 1 1 1 114 ALA . A . 101 ALA m 1 19866 1 1 1 1 115 ALA . A . 102 ALA m 1 19866 1 1 1 1 116 LYS . A . 103 LYS m 1 19866 1 1 1 1 117 ALA . A . 104 ALA n 1 19866 1 1 1 1 118 GLN . A . 105 GLN o 1 19866 1 1 1 1 119 GLY . A . 106 GLY p 1 19866 1 1 1 1 120 ASN . A . 107 ASN a 1 19866 1 1 1 1 121 TYR . A . 108 TYR a 1 19866 1 1 1 1 122 TYR . A . 109 TYR c 1 19866 1 1 1 1 123 ASP . A . 110 ASP f 1 19866 1 1 1 1 124 GLU . A . 111 GLU k 1 19866 1 1 1 1 125 THR . A . 112 THR l 1 19866 1 1 1 1 126 ALA . A . 113 ALA m 1 19866 1 1 1 1 127 VAL . A . 114 VAL m 1 19866 1 1 1 1 128 GLU . A . 115 GLU m 1 19866 1 1 1 1 129 ALA . A . 116 ALA m 1 19866 1 1 1 1 130 ASN . A . 117 ASN b 1 19866 1 1 1 1 131 ARG . A . 118 ARG d 1 19866 1 1 1 1 132 THR . A . 119 THR f 1 19866 1 1 1 1 133 ASN . A . 120 ASN k 1 19866 1 1 1 1 134 GLU . A . 121 GLU l 1 19866 1 1 1 1 135 GLN . A . 122 GLN m 1 19866 1 1 1 1 136 ARG . A . 123 ARG m 1 19866 1 1 1 1 137 ILE . A . 124 ILE m 1 19866 1 1 1 1 138 ALA . A . 125 ALA m 1 19866 1 1 1 1 139 ASP . A . 126 ASP m 1 19866 1 1 1 1 140 ASP . A . 127 ASP m 1 19866 1 1 1 1 141 ILE . A . 128 ILE m 1 19866 1 1 1 1 142 LYS . A . 129 LYS m 1 19866 1 1 1 1 143 ALA . A . 130 ALA m 1 19866 1 1 1 1 144 GLN . A . 131 GLN n 1 19866 1 1 1 1 145 THR . A . 132 THR o 1 19866 1 1 1 1 146 GLY . A . 133 GLY p 1 19866 1 1 1 1 147 LYS . A . 134 LYS a 1 19866 1 1 1 1 148 ASP . A . 135 ASP c 1 19866 1 1 1 1 149 VAL . A . 136 VAL d 1 19866 1 1 1 1 150 THR . A . 137 THR d 1 19866 1 1 1 1 151 VAL . A . 138 VAL d 1 19866 1 1 1 1 152 THR . A . 139 THR d 1 19866 1 1 1 1 153 LYS . A . 140 LYS d 1 19866 1 1 1 1 154 ASP . A . 141 ASP f 1 19866 1 1 1 1 155 GLU . A . 142 GLU k 1 19866 1 1 1 1 156 ASN . A . 143 ASN o 1 19866 1 1 1 1 157 GLY . A . 144 GLY p 1 19866 1 1 1 1 158 ASN . A . 145 ASN a 1 19866 1 1 1 1 159 TYR . A . 146 TYR c 1 19866 1 1 1 1 160 VAL . A . 147 VAL d 1 19866 1 1 1 1 161 VAL . A . 148 VAL d 1 19866 1 1 1 1 162 LYS . A . 149 LYS d 1 19866 1 1 1 1 163 ASP . A . 150 ASP f 1 19866 1 1 1 1 164 GLU . A . 151 GLU k 1 19866 1 1 1 1 165 LYS . A . 152 LYS o 1 19866 1 1 1 1 166 GLY . A . 153 GLY p 1 19866 1 1 1 1 167 ASN . A . 154 ASN a 1 19866 1 1 1 1 168 VAL . A . 155 VAL f 1 19866 1 1 1 1 169 VAL . A . 156 VAL b 1 19866 1 1 1 1 170 ALA . A . 157 ALA d 1 19866 1 1 1 1 171 THR . A . 158 THR c 1 19866 1 1 1 1 172 VAL . A . 159 VAL d 1 19866 1 1 1 1 173 ASP . A . 160 ASP f 1 19866 1 1 1 1 174 LYS . A . 161 LYS k 1 19866 1 1 1 1 175 ASP . A . 162 ASP o 1 19866 1 1 1 1 176 GLY . A . 163 GLY m 1 19866 1 1 1 1 177 LYS . A . 164 LYS a 1 19866 1 1 1 1 178 THR . A . 165 THR c 1 19866 1 1 1 1 179 VAL . A . 166 VAL c 1 19866 1 1 1 1 180 LYS . A . 167 LYS f 1 19866 1 1 1 1 181 ALA . A . 168 ALA b 1 19866 1 1 1 1 182 ASP . A . 169 ASP a 1 19866 1 1 1 1 183 ALA . A . 170 ALA c 1 19866 1 1 1 1 184 LYS . A . 171 LYS d 1 19866 1 1 1 1 185 ALA . A . 172 ALA . 1 19866 1 1 1 1 186 GLY . A . 173 GLY . 1 19866 1 stop_ save_