data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2m5m_4824#A _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . A . 1 TYR . 1 19060 1 1 1 1 2 THR . A . 2 THR . 1 19060 1 1 1 1 3 ILE . A . 3 ILE d 1 19060 1 1 1 1 4 ALA . A . 4 ALA d 1 19060 1 1 1 1 5 ALA . A . 5 ALA d 1 19060 1 1 1 1 6 LEU . A . 6 LEU d 1 19060 1 1 1 1 7 LEU . A . 7 LEU d 1 19060 1 1 1 1 8 SER . A . 8 SER d 1 19060 1 1 1 1 9 PRO . A . 9 PRO d 1 19060 1 1 1 1 10 TYR . A . 10 TYR . 1 19060 1 1 1 1 11 SER . A . 11 SER . 1 19060 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db2m5m_4824#B _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . B . 1 TYR . 1 19060 2 1 1 1 2 THR . B . 2 THR . 1 19060 2 1 1 1 3 ILE . B . 3 ILE d 1 19060 2 1 1 1 4 ALA . B . 4 ALA d 1 19060 2 1 1 1 5 ALA . B . 5 ALA d 1 19060 2 1 1 1 6 LEU . B . 6 LEU d 1 19060 2 1 1 1 7 LEU . B . 7 LEU d 1 19060 2 1 1 1 8 SER . B . 8 SER d 1 19060 2 1 1 1 9 PRO . B . 9 PRO d 1 19060 2 1 1 1 10 TYR . B . 10 TYR . 1 19060 2 1 1 1 11 SER . B . 11 SER . 1 19060 2 stop_ save_ save_PB_annotation_3 _PB_list.Sf_category PB_list _PB_list.ID 3 _PB_list.Query_ID db2m5m_4824#C _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . C . 1 TYR . 1 19060 3 1 1 1 2 THR . C . 2 THR . 1 19060 3 1 1 1 3 ILE . C . 3 ILE d 1 19060 3 1 1 1 4 ALA . C . 4 ALA d 1 19060 3 1 1 1 5 ALA . C . 5 ALA d 1 19060 3 1 1 1 6 LEU . C . 6 LEU d 1 19060 3 1 1 1 7 LEU . C . 7 LEU d 1 19060 3 1 1 1 8 SER . C . 8 SER d 1 19060 3 1 1 1 9 PRO . C . 9 PRO d 1 19060 3 1 1 1 10 TYR . C . 10 TYR . 1 19060 3 1 1 1 11 SER . C . 11 SER . 1 19060 3 stop_ save_ save_PB_annotation_4 _PB_list.Sf_category PB_list _PB_list.ID 4 _PB_list.Query_ID db2m5m_4824#D _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . D . 1 TYR . 1 19060 4 1 1 1 2 THR . D . 2 THR . 1 19060 4 1 1 1 3 ILE . D . 3 ILE d 1 19060 4 1 1 1 4 ALA . D . 4 ALA d 1 19060 4 1 1 1 5 ALA . D . 5 ALA d 1 19060 4 1 1 1 6 LEU . D . 6 LEU d 1 19060 4 1 1 1 7 LEU . D . 7 LEU d 1 19060 4 1 1 1 8 SER . D . 8 SER d 1 19060 4 1 1 1 9 PRO . D . 9 PRO d 1 19060 4 1 1 1 10 TYR . D . 10 TYR . 1 19060 4 1 1 1 11 SER . D . 11 SER . 1 19060 4 stop_ save_ save_PB_annotation_5 _PB_list.Sf_category PB_list _PB_list.ID 5 _PB_list.Query_ID db2m5m_4824#E _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . E . 1 TYR . 1 19060 5 1 1 1 2 THR . E . 2 THR . 1 19060 5 1 1 1 3 ILE . E . 3 ILE d 1 19060 5 1 1 1 4 ALA . E . 4 ALA d 1 19060 5 1 1 1 5 ALA . E . 5 ALA d 1 19060 5 1 1 1 6 LEU . E . 6 LEU d 1 19060 5 1 1 1 7 LEU . E . 7 LEU d 1 19060 5 1 1 1 8 SER . E . 8 SER d 1 19060 5 1 1 1 9 PRO . E . 9 PRO d 1 19060 5 1 1 1 10 TYR . E . 10 TYR . 1 19060 5 1 1 1 11 SER . E . 11 SER . 1 19060 5 stop_ save_ save_PB_annotation_6 _PB_list.Sf_category PB_list _PB_list.ID 6 _PB_list.Query_ID db2m5m_4824#F _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . F . 1 TYR . 1 19060 6 1 1 1 2 THR . F . 2 THR . 1 19060 6 1 1 1 3 ILE . F . 3 ILE d 1 19060 6 1 1 1 4 ALA . F . 4 ALA d 1 19060 6 1 1 1 5 ALA . F . 5 ALA d 1 19060 6 1 1 1 6 LEU . F . 6 LEU d 1 19060 6 1 1 1 7 LEU . F . 7 LEU d 1 19060 6 1 1 1 8 SER . F . 8 SER d 1 19060 6 1 1 1 9 PRO . F . 9 PRO d 1 19060 6 1 1 1 10 TYR . F . 10 TYR . 1 19060 6 1 1 1 11 SER . F . 11 SER . 1 19060 6 stop_ save_ save_PB_annotation_7 _PB_list.Sf_category PB_list _PB_list.ID 7 _PB_list.Query_ID db2m5m_4824#G _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . G . 1 TYR . 1 19060 7 1 1 1 2 THR . G . 2 THR . 1 19060 7 1 1 1 3 ILE . G . 3 ILE d 1 19060 7 1 1 1 4 ALA . G . 4 ALA d 1 19060 7 1 1 1 5 ALA . G . 5 ALA d 1 19060 7 1 1 1 6 LEU . G . 6 LEU d 1 19060 7 1 1 1 7 LEU . G . 7 LEU d 1 19060 7 1 1 1 8 SER . G . 8 SER d 1 19060 7 1 1 1 9 PRO . G . 9 PRO d 1 19060 7 1 1 1 10 TYR . G . 10 TYR . 1 19060 7 1 1 1 11 SER . G . 11 SER . 1 19060 7 stop_ save_ save_PB_annotation_8 _PB_list.Sf_category PB_list _PB_list.ID 8 _PB_list.Query_ID db2m5m_4824#H _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . H . 1 TYR . 1 19060 8 1 1 1 2 THR . H . 2 THR . 1 19060 8 1 1 1 3 ILE . H . 3 ILE d 1 19060 8 1 1 1 4 ALA . H . 4 ALA d 1 19060 8 1 1 1 5 ALA . H . 5 ALA d 1 19060 8 1 1 1 6 LEU . H . 6 LEU d 1 19060 8 1 1 1 7 LEU . H . 7 LEU d 1 19060 8 1 1 1 8 SER . H . 8 SER d 1 19060 8 1 1 1 9 PRO . H . 9 PRO d 1 19060 8 1 1 1 10 TYR . H . 10 TYR . 1 19060 8 1 1 1 11 SER . H . 11 SER . 1 19060 8 stop_ save_ save_PB_annotation_9 _PB_list.Sf_category PB_list _PB_list.ID 9 _PB_list.Query_ID db2m5m_4824#I _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . I . 1 TYR . 1 19060 9 1 1 1 2 THR . I . 2 THR . 1 19060 9 1 1 1 3 ILE . I . 3 ILE d 1 19060 9 1 1 1 4 ALA . I . 4 ALA d 1 19060 9 1 1 1 5 ALA . I . 5 ALA d 1 19060 9 1 1 1 6 LEU . I . 6 LEU d 1 19060 9 1 1 1 7 LEU . I . 7 LEU d 1 19060 9 1 1 1 8 SER . I . 8 SER d 1 19060 9 1 1 1 9 PRO . I . 9 PRO d 1 19060 9 1 1 1 10 TYR . I . 10 TYR . 1 19060 9 1 1 1 11 SER . I . 11 SER . 1 19060 9 stop_ save_ save_PB_annotation_10 _PB_list.Sf_category PB_list _PB_list.ID 10 _PB_list.Query_ID db2m5m_4824#J _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . J . 1 TYR . 1 19060 10 1 1 1 2 THR . J . 2 THR . 1 19060 10 1 1 1 3 ILE . J . 3 ILE d 1 19060 10 1 1 1 4 ALA . J . 4 ALA d 1 19060 10 1 1 1 5 ALA . J . 5 ALA d 1 19060 10 1 1 1 6 LEU . J . 6 LEU d 1 19060 10 1 1 1 7 LEU . J . 7 LEU d 1 19060 10 1 1 1 8 SER . J . 8 SER d 1 19060 10 1 1 1 9 PRO . J . 9 PRO d 1 19060 10 1 1 1 10 TYR . J . 10 TYR . 1 19060 10 1 1 1 11 SER . J . 11 SER . 1 19060 10 stop_ save_ save_PB_annotation_11 _PB_list.Sf_category PB_list _PB_list.ID 11 _PB_list.Query_ID db2m5m_4824#K _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . K . 1 TYR . 1 19060 11 1 1 1 2 THR . K . 2 THR . 1 19060 11 1 1 1 3 ILE . K . 3 ILE d 1 19060 11 1 1 1 4 ALA . K . 4 ALA d 1 19060 11 1 1 1 5 ALA . K . 5 ALA d 1 19060 11 1 1 1 6 LEU . K . 6 LEU d 1 19060 11 1 1 1 7 LEU . K . 7 LEU d 1 19060 11 1 1 1 8 SER . K . 8 SER d 1 19060 11 1 1 1 9 PRO . K . 9 PRO d 1 19060 11 1 1 1 10 TYR . K . 10 TYR . 1 19060 11 1 1 1 11 SER . K . 11 SER . 1 19060 11 stop_ save_ save_PB_annotation_12 _PB_list.Sf_category PB_list _PB_list.ID 12 _PB_list.Query_ID db2m5m_4824#L _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2m5m.ent _PB_list.Output_file_name bmr19060_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr19060_PB.str _PB_list.AA_seq_one_letter_code YTIAALLSPYS _PB_list.PB_seq_code zzdddddddzz _PB_list.PDB_ID 2M5M _PB_list.PDBX_exptl_method "SOLID-STATE NMR, ELECTRON MICROSCOPY" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 19060 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 TYR . L . 1 TYR . 1 19060 12 1 1 1 2 THR . L . 2 THR . 1 19060 12 1 1 1 3 ILE . L . 3 ILE d 1 19060 12 1 1 1 4 ALA . L . 4 ALA d 1 19060 12 1 1 1 5 ALA . L . 5 ALA d 1 19060 12 1 1 1 6 LEU . L . 6 LEU d 1 19060 12 1 1 1 7 LEU . L . 7 LEU d 1 19060 12 1 1 1 8 SER . L . 8 SER d 1 19060 12 1 1 1 9 PRO . L . 9 PRO d 1 19060 12 1 1 1 10 TYR . L . 10 TYR . 1 19060 12 1 1 1 11 SER . L . 11 SER . 1 19060 12 stop_ save_