data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2jod_2665#A _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2jod.ent _PB_list.Output_file_name bmr15166_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15166_PB.str _PB_list.AA_seq_one_letter_code MGSMAHSDGIFKKEQAMCLEKIQRANELMGFNDSSPGCPGMWDNITCWKPAHVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDGWSEPFPHYFDACGFDEYESET _PB_list.PB_seq_code zzcgklmlnnpmmlmmmmmmmmmmmmnmmnmpmbgcdebdcdfkbacddddehiacddddehjklccbdfbhpaiadddddfklpcdddddeehpadfkbcblgzz _PB_list.PDB_ID 2JOD _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 15166 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . A . 1 MET . 1 15166 1 1 1 1 2 GLY . A . 2 GLY . 1 15166 1 1 1 1 3 SER . A . 3 SER c 1 15166 1 1 1 1 4 MET . A . 4 MET g 1 15166 1 1 1 1 5 ALA . A . 5 ALA k 1 15166 1 1 1 1 6 HIS . A . 6 HIS l 1 15166 1 1 1 1 7 SER . A . 7 SER m 1 15166 1 1 1 1 8 ASP . A . 8 ASP l 1 15166 1 1 1 1 9 GLY . A . 9 GLY n 1 15166 1 1 1 1 10 ILE . A . 10 ILE n 1 15166 1 1 1 1 11 PHE . A . 11 PHE p 1 15166 1 1 1 1 12 LYS . A . 12 LYS m 1 15166 1 1 1 1 13 LYS . A . 13 LYS m 1 15166 1 1 1 1 14 GLU . A . 14 GLU l 1 15166 1 1 1 1 15 GLN . A . 15 GLN m 1 15166 1 1 1 1 16 ALA . A . 16 ALA m 1 15166 1 1 1 1 17 MET . A . 17 MET m 1 15166 1 1 1 1 18 CYS . A . 18 CYS m 1 15166 1 1 1 1 19 LEU . A . 19 LEU m 1 15166 1 1 1 1 20 GLU . A . 20 GLU m 1 15166 1 1 1 1 21 LYS . A . 21 LYS m 1 15166 1 1 1 1 22 ILE . A . 22 ILE m 1 15166 1 1 1 1 23 GLN . A . 23 GLN m 1 15166 1 1 1 1 24 ARG . A . 24 ARG m 1 15166 1 1 1 1 25 ALA . A . 25 ALA m 1 15166 1 1 1 1 26 ASN . A . 26 ASN m 1 15166 1 1 1 1 27 GLU . A . 27 GLU n 1 15166 1 1 1 1 28 LEU . A . 28 LEU m 1 15166 1 1 1 1 29 MET . A . 29 MET m 1 15166 1 1 1 1 30 GLY . A . 30 GLY n 1 15166 1 1 1 1 31 PHE . A . 31 PHE m 1 15166 1 1 1 1 32 ASN . A . 32 ASN p 1 15166 1 1 1 1 33 ASP . A . 33 ASP m 1 15166 1 1 1 1 34 SER . A . 34 SER b 1 15166 1 1 1 1 35 SER . A . 35 SER g 1 15166 1 1 1 1 36 PRO . A . 36 PRO c 1 15166 1 1 1 1 37 GLY . A . 37 GLY d 1 15166 1 1 1 1 38 CYS . A . 38 CYS e 1 15166 1 1 1 1 39 PRO . A . 39 PRO b 1 15166 1 1 1 1 40 GLY . A . 40 GLY d 1 15166 1 1 1 1 41 MET . A . 41 MET c 1 15166 1 1 1 1 42 TRP . A . 42 TRP d 1 15166 1 1 1 1 43 ASP . A . 43 ASP f 1 15166 1 1 1 1 44 ASN . A . 44 ASN k 1 15166 1 1 1 1 45 ILE . A . 45 ILE b 1 15166 1 1 1 1 46 THR . A . 46 THR a 1 15166 1 1 1 1 47 CYS . A . 47 CYS c 1 15166 1 1 1 1 48 TRP . A . 48 TRP d 1 15166 1 1 1 1 49 LYS . A . 49 LYS d 1 15166 1 1 1 1 50 PRO . A . 50 PRO d 1 15166 1 1 1 1 51 ALA . A . 51 ALA d 1 15166 1 1 1 1 52 HIS . A . 52 HIS e 1 15166 1 1 1 1 53 VAL . A . 53 VAL h 1 15166 1 1 1 1 54 GLY . A . 54 GLY i 1 15166 1 1 1 1 55 GLU . A . 55 GLU a 1 15166 1 1 1 1 56 MET . A . 56 MET c 1 15166 1 1 1 1 57 VAL . A . 57 VAL d 1 15166 1 1 1 1 58 LEU . A . 58 LEU d 1 15166 1 1 1 1 59 VAL . A . 59 VAL d 1 15166 1 1 1 1 60 SER . A . 60 SER d 1 15166 1 1 1 1 61 CYS . A . 61 CYS e 1 15166 1 1 1 1 62 PRO . A . 62 PRO h 1 15166 1 1 1 1 63 GLU . A . 63 GLU j 1 15166 1 1 1 1 64 LEU . A . 64 LEU k 1 15166 1 1 1 1 65 PHE . A . 65 PHE l 1 15166 1 1 1 1 66 ARG . A . 66 ARG c 1 15166 1 1 1 1 67 ILE . A . 67 ILE c 1 15166 1 1 1 1 68 PHE . A . 68 PHE b 1 15166 1 1 1 1 69 ASN . A . 69 ASN d 1 15166 1 1 1 1 70 PRO . A . 70 PRO f 1 15166 1 1 1 1 71 ASP . A . 71 ASP b 1 15166 1 1 1 1 72 GLN . A . 72 GLN h 1 15166 1 1 1 1 73 ASP . A . 73 ASP p 1 15166 1 1 1 1 74 MET . A . 74 MET a 1 15166 1 1 1 1 75 GLY . A . 75 GLY i 1 15166 1 1 1 1 76 VAL . A . 76 VAL a 1 15166 1 1 1 1 77 VAL . A . 77 VAL d 1 15166 1 1 1 1 78 SER . A . 78 SER d 1 15166 1 1 1 1 79 ARG . A . 79 ARG d 1 15166 1 1 1 1 80 ASN . A . 80 ASN d 1 15166 1 1 1 1 81 CYS . A . 81 CYS d 1 15166 1 1 1 1 82 THR . A . 82 THR f 1 15166 1 1 1 1 83 GLU . A . 83 GLU k 1 15166 1 1 1 1 84 ASP . A . 84 ASP l 1 15166 1 1 1 1 85 GLY . A . 85 GLY p 1 15166 1 1 1 1 86 TRP . A . 86 TRP c 1 15166 1 1 1 1 87 SER . A . 87 SER d 1 15166 1 1 1 1 88 GLU . A . 88 GLU d 1 15166 1 1 1 1 89 PRO . A . 89 PRO d 1 15166 1 1 1 1 90 PHE . A . 90 PHE d 1 15166 1 1 1 1 91 PRO . A . 91 PRO d 1 15166 1 1 1 1 92 HIS . A . 92 HIS e 1 15166 1 1 1 1 93 TYR . A . 93 TYR e 1 15166 1 1 1 1 94 PHE . A . 94 PHE h 1 15166 1 1 1 1 95 ASP . A . 95 ASP p 1 15166 1 1 1 1 96 ALA . A . 96 ALA a 1 15166 1 1 1 1 97 CYS . A . 97 CYS d 1 15166 1 1 1 1 98 GLY . A . 98 GLY f 1 15166 1 1 1 1 99 PHE . A . 99 PHE k 1 15166 1 1 1 1 100 ASP . A . 100 ASP b 1 15166 1 1 1 1 101 GLU . A . 101 GLU c 1 15166 1 1 1 1 102 TYR . A . 102 TYR b 1 15166 1 1 1 1 103 GLU . A . 103 GLU l 1 15166 1 1 1 1 104 SER . A . 104 SER g 1 15166 1 1 1 1 105 GLU . A . 105 GLU . 1 15166 1 1 1 1 106 THR . A . 106 THR . 1 15166 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db2jod_2665#B _PB_list.Queried_date 2014-12-16 _PB_list.Input_file_name pdb2jod.ent _PB_list.Output_file_name bmr15166_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15166_PB.str _PB_list.AA_seq_one_letter_code FTDSYSRYRKQMAVKKYLAAVLGKRYKQRVKNK _PB_list.PB_seq_code zzklmmmmmmmmmmmmmmmmmmmmpmblommzz _PB_list.PDB_ID 2JOD _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "simulated annealing" _PB_list.Entry_ID 15166 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 2 1 2 1 PHE . B . 1 PHE . 1 15166 2 2 1 2 2 THR . B . 2 THR . 1 15166 2 2 1 2 3 ASP . B . 3 ASP k 1 15166 2 2 1 2 4 SER . B . 4 SER l 1 15166 2 2 1 2 5 TYR . B . 5 TYR m 1 15166 2 2 1 2 6 SER . B . 6 SER m 1 15166 2 2 1 2 7 ARG . B . 7 ARG m 1 15166 2 2 1 2 8 TYR . B . 8 TYR m 1 15166 2 2 1 2 9 ARG . B . 9 ARG m 1 15166 2 2 1 2 10 LYS . B . 10 LYS m 1 15166 2 2 1 2 11 GLN . B . 11 GLN m 1 15166 2 2 1 2 12 MET . B . 12 MET m 1 15166 2 2 1 2 13 ALA . B . 13 ALA m 1 15166 2 2 1 2 14 VAL . B . 14 VAL m 1 15166 2 2 1 2 15 LYS . B . 15 LYS m 1 15166 2 2 1 2 16 LYS . B . 16 LYS m 1 15166 2 2 1 2 17 TYR . B . 17 TYR m 1 15166 2 2 1 2 18 LEU . B . 18 LEU m 1 15166 2 2 1 2 19 ALA . B . 19 ALA m 1 15166 2 2 1 2 20 ALA . B . 20 ALA m 1 15166 2 2 1 2 21 VAL . B . 21 VAL m 1 15166 2 2 1 2 22 LEU . B . 22 LEU m 1 15166 2 2 1 2 23 GLY . B . 23 GLY m 1 15166 2 2 1 2 24 LYS . B . 24 LYS m 1 15166 2 2 1 2 25 ARG . B . 25 ARG p 1 15166 2 2 1 2 26 TYR . B . 26 TYR m 1 15166 2 2 1 2 27 LYS . B . 27 LYS b 1 15166 2 2 1 2 28 GLN . B . 28 GLN l 1 15166 2 2 1 2 29 ARG . B . 29 ARG o 1 15166 2 2 1 2 30 VAL . B . 30 VAL m 1 15166 2 2 1 2 31 LYS . B . 31 LYS m 1 15166 2 2 1 2 32 ASN . B . 32 ASN . 1 15166 2 2 1 2 33 LYS . B . 33 LYS . 1 15166 2 stop_ save_